| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1431 |
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| Symbol | |
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| ID | 4924316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1646533 |
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| End bp | 1646988 |
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| Gene Length | 456 bp |
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| Protein Length | 151 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640162970 |
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| Product | hypothetical protein |
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| Protein accession | YP_001093557 |
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| Protein GI | 127512360 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1664] Integral membrane protein CcmA involved in cell shape determination |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000096503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.140917 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTGGAA AGAAAAATAA CAAAGCAGGT CTCACCTTTA TTGCGCAAGG GACTAAATTA
TCAGGGGAAA CTCATTTTGC CGGCGAAGCC CTCATCGGCG GCGAACTGCA CGGCAAAATC
AGCGCGACCG GTAAGCTGAC GATCGAAGTC GATGGTTATA TCGAAGGCGA GCTGCAGTGT
AAGGAAATTA AGGTCTCTGG TGCGTTTAAG GGCAAGATGA AGTGTGAAAA ACTGAACATC
ACCAGCACAG GTAGCGTCGA GGGCGAGATC GCCTGTAACT CGATGGAGAT CTTCGAAGGG
GGTCAGTTTA TCGGGATGCG CGTACGCGAA GAGGTCGCTC TGCTCGCCAG CGAACCAGAC
GTCCAAGCAA TTAACCCTGA AACCAAATCT GATGCCGAAC CTGAGGCAGA GTCTCAGTTA
GACAATTACT TTAAAGAACT CACTAAATCT GCCTAA
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| Protein sequence | MFGKKNNKAG LTFIAQGTKL SGETHFAGEA LIGGELHGKI SATGKLTIEV DGYIEGELQC
KEIKVSGAFK GKMKCEKLNI TSTGSVEGEI ACNSMEIFEG GQFIGMRVRE EVALLASEPD
VQAINPETKS DAEPEAESQL DNYFKELTKS A
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