Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1418 |
Symbol | |
ID | 4922035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1631972 |
End bp | 1632892 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640162958 |
Product | UTP-glucose-1-phosphate uridylyltransferase GalU |
Protein accession | YP_001093545 |
Protein GI | 127512348 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1210] UDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01099] UTP-glucose-1-phosphate uridylyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0173335 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGGGGTT GTCTGTTTTA TCATATTGGA TTTTTTATGA AAGTTGTTAT TCCTGTTGCA GGTCTTGGCA CGCGCATGTT GCCTGCAACC AAAGCCATAC CGAAAGAGAT GTTGCCGCTA GTTGACAAGC CACTCATTCA ATATATTGTT AACGAGTGCG TATCAGCTGG TGTGAAAGAG ATTGTATTGG TAACTCATGC GAGTAAGAAT GCTATCGAGA ACCATTTTGA TACTTCCTAT GAACTTGAGT CTACGCTTGA GAAGCGTGTA AAGCGTCAGT TACTGGACGA GGTGCAATCA ATTTGCCCCA AAGATGTGAC CATCATGCAC GTGCGCCAAG GCGAGGCTAA GGGGCTTGGT CATGCCGTAC TTTGTGCTAA ACCTTGTATT GGCAATAACC CTTTCGCTGT CGTATTGCCG GATGTGATCT TAGATGAGTA CAGTGCCGAT CAAAGCTCAG AAAACCTTGC GGCAATGATT AAACATTATA AAGCGACTCA AGCTAGCCAA ATCATGGTAG CGCCAGTGGC TCTAGATGAA GTTAACAAGT ACGGAATTGC CGATTGCGGC GGAGTGAATA TCGAACCTGG TGAATCATCA GTTATTAAGG CTATGGTTGA AAAGCCTGCT ATTGATGAAG CCCCGTCTAA TCTTGCTGTT GTAGGTCGTT ACGTTTTGTC TGAAAAAATC TGGGACTTGC TGGCTAAAAC CCCTGCTGGT GCAGGGGATG AAATCCAATT GACAGACGCA ATCGACATGT TGATTGAATC TGACACTGTC GAAGCCTTCA ATATGACAGG TAAGTCTCAC GATTGTGGCG ACAAGCTTGG TTATATGGCA GCCTTTGTTG AATACGGCCT GCGTAATGAA AAGCTGGGTA AAGAGTTTCG TCAGCAGTTA GATAACCTGC TAGCACAATA A
|
Protein sequence | MGGCLFYHIG FFMKVVIPVA GLGTRMLPAT KAIPKEMLPL VDKPLIQYIV NECVSAGVKE IVLVTHASKN AIENHFDTSY ELESTLEKRV KRQLLDEVQS ICPKDVTIMH VRQGEAKGLG HAVLCAKPCI GNNPFAVVLP DVILDEYSAD QSSENLAAMI KHYKATQASQ IMVAPVALDE VNKYGIADCG GVNIEPGESS VIKAMVEKPA IDEAPSNLAV VGRYVLSEKI WDLLAKTPAG AGDEIQLTDA IDMLIESDTV EAFNMTGKSH DCGDKLGYMA AFVEYGLRNE KLGKEFRQQL DNLLAQ
|
| |