Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1417 |
Symbol | |
ID | 4921488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1630900 |
End bp | 1631943 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640162957 |
Product | undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase |
Protein accession | YP_001093544 |
Protein GI | 127512347 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
TIGRFAM ID | [TIGR02380] undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0067486 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAATACT TTATACCGTT TGTTACGGTG TTTTGCTTAA CGTGTGTGGC AATTAAATTG TTTCATCCAA TTGCAGAGAA AGTGGGCTTA GTAGATCTAC CTAATGAAAG GAAAACACAT GTTGGTGCAA TACCGTTAAT CGGTGGCGTG GCAATATATT GTAGTGTTTT GCTTGTTTCC AGCATTGTGT TTGAACAAAA TCAGGTGTTC AATCTTTACT TGATTTCTGC TGCGCTCATA TTGTTTTTGG GGGTGTTGGA CGACAAATAT GATTTGTCTG TTCGAGTGAG GATTGTTGCG CAAGTGATCA CCGCTTCAAT TCTTGTCTTT GGTGCAGGAT TTTACCTTAC TTCATTAGGC CATATTACTT ATTTCTTTGA GTTGAAGCTT GGCTACGTAG GTGTTTTTGT CACCATATTG GCAGTTATCG GTGCCATTAA TGCCTTCAAT ATGGTGGATG GCATTGATGG CTTAGCCGGT ATGTTGAGCC TAGTCACTTT TACCTCTTTG GCACTGCTGT TTTACACGGC CGGTAATCAT TGGTTTATTC TTCCACTACT TTTCATTGGC GCAATAATTG GGTACTTGAT ATTTAATTTA AGATGGCCTT TTGAAACCGT TCAAAAAATT TTTATGGGCG ATGCGGGGAG TATGCTGATT GGGTTGACGG TTGTATGGTT ACTCGTGTTG GGTGTTGAAG CTGATGCTCG GGTATTTGCA CCCGTTACCG CACTGTATCT GATTGGTATT CCGTTGATGG ATATGGCGGC CATCATGTAC CGTCGTGTCA AAAAAGGGAT GTCTCCTTTT AAGCCTGACC GAGATCACCT TCACCACATA TTTGAAAGAG CGGGCTATAG TCGAAAACAA ACCCTGGTTC GGATTTCACT GGCTTCCATA GTACTCGCTG CACTCGGGGT TTCGGGAGAA TGGATGCTAG TGCCTGAGTG GATTATGTTT TTGGGCTTTG TTGCTATTTT TGTGGCCTAT AACTGGGCAT TATCACACAT TTGGCAAATA TTGACTTGGC TTCGTAAAGC TTAG
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Protein sequence | MEYFIPFVTV FCLTCVAIKL FHPIAEKVGL VDLPNERKTH VGAIPLIGGV AIYCSVLLVS SIVFEQNQVF NLYLISAALI LFLGVLDDKY DLSVRVRIVA QVITASILVF GAGFYLTSLG HITYFFELKL GYVGVFVTIL AVIGAINAFN MVDGIDGLAG MLSLVTFTSL ALLFYTAGNH WFILPLLFIG AIIGYLIFNL RWPFETVQKI FMGDAGSMLI GLTVVWLLVL GVEADARVFA PVTALYLIGI PLMDMAAIMY RRVKKGMSPF KPDRDHLHHI FERAGYSRKQ TLVRISLASI VLAALGVSGE WMLVPEWIMF LGFVAIFVAY NWALSHIWQI LTWLRKA
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