Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1413 |
Symbol | |
ID | 4920822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1626400 |
End bp | 1627377 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640162954 |
Product | hypothetical protein |
Protein accession | YP_001093541 |
Protein GI | 127512344 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00241819 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTATAGAA TTAGTATCTA TAAGATAGGT TTTTTATTTC TAGCTTTAAG TCTCTGCGCT ATTTTGGCTT TAAGACATAT CCCTAGTTTT TATGACATCA ATGATTCTGG ACGATATGTA GCTTGGATTG AGTCTTATTG CCTAGGGGAG GAGGGCTATT ATGAAGATAA ACTTGAAAGC CCTTCTTATC AACTATTTTA TTCAGTGGCT ACGCTTAATT GTACGATAAC TGAGCCCCAC ACATTTCTTT TTATCGTTGC CTTGTTTACT CCTCTTCCAT TTGTTTTGTT CAGTAGAGGA GGGTGTGGTA ACTTCATGTG GAGTTTGACT TTTTTTTTAA GTGTCTTTAG TTTAGAGTTA ATGACAAATG CTTTGAGGCA AAGCTTAGGT TTAATGCTTT TTATGTTTTC TCTGGCGCTT ATAAAAAAGT CTAAACTCTT CGCTTTTGTA ATTCTAATTG TGTCAATATT TAGCCATCCT TCTGTCGCAA TATATAGTCC GCTTTTTATA GTTATGGCAT ATAATGGTTT TGTGCTTAGA GTGTTGCGTC ACAAGCCTTA CATGTTTTTA TTTTTTAGCT TGGTTGTTTT GTTTTTGGGG GTTATTTCAA ATTACTCTTT GTTTTGGGGG CAGTTAAACT TCTATCAATC TATATATATG AACTCATTGA ATTTAAGCTT TGTGCTTTAT GTGACCTTTC CGGTCTTTTT TGTGTGGTTT ACTCGTTACG TTGTAGATTA TGAATTAGTA AGTTTCGACG AAAGGTTCTG TTTTTTTTAT TCTTTGTTTT TAATTGTGGT TACTTTAGTT TTTTTTCCCG CAATAACTTA TAGGGTGGTT TTTTTAACCT TTCCAATTTA TATATTTATA ATTAGTAGGG AGGGAGTGAC CAAACTGTCT GGGTTATGCG CTTGTATTGG TTTGGTAATT CATATGTCTG TGATGATGCT GTTCTCTTCT AATAGGATTT TATATTAA
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Protein sequence | MYRISIYKIG FLFLALSLCA ILALRHIPSF YDINDSGRYV AWIESYCLGE EGYYEDKLES PSYQLFYSVA TLNCTITEPH TFLFIVALFT PLPFVLFSRG GCGNFMWSLT FFLSVFSLEL MTNALRQSLG LMLFMFSLAL IKKSKLFAFV ILIVSIFSHP SVAIYSPLFI VMAYNGFVLR VLRHKPYMFL FFSLVVLFLG VISNYSLFWG QLNFYQSIYM NSLNLSFVLY VTFPVFFVWF TRYVVDYELV SFDERFCFFY SLFLIVVTLV FFPAITYRVV FLTFPIYIFI ISREGVTKLS GLCACIGLVI HMSVMMLFSS NRILY
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