| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1405 |
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| Symbol | |
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| ID | 4921415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1617188 |
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| End bp | 1618246 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640162946 |
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| Product | glycosyl transferase, group 1 |
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| Protein accession | YP_001093533 |
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| Protein GI | 127512336 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0023982 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGAGAAAAG TAGTAGTTGT GGGGACTGTG GGTATACCTG CATGTTATGG AGGCTTCGAG
TCACTTGTCG AGAATTTAAC AAAGAATTCA TCAGCTGAAA TAAAGTATGA GGTCATTTGT
TCATCAAATT CTTATCCTGA AAAAAAAATA GAGTATAATG GAGCAAAGCT ATCTTATATA
CCGTTAAGCG CAAATGGTAT GCAAAGTATT TTCTATGATA TCGTTTCGCT GATTAAATGT
ATTTTTTCTC GTCCCGATGT CGTTTTAGTA TTAGGGGTTT CTGGGTGTAT TTTTCTTCCA
TTTTTTAAGT TGTTTTCTAG AGCAAGAGTG ATAACAAATA TTGACGGATT AGAATGGAAG
AGAGATAAGT GGGGTAGTCT CCCTCGAAAG TTTCTTAAGA TCTCAGAGAA AATGGCAGTT
AAGTTTTCTG ATGTTGTTGT GACTGACAAT AAGGCTATTA GCGATTATGT CTTGTATGAA
TATGGGATAA ACAGCGAAAC AATAGCTTAC GGTGGTGATC ATGCAATAAT TGGTGGTCAA
CATCATCAGA ATTTATCTGT TCAGGAATAT GCTCTTGCTC TGTGCCGGAT TGAACCTGAA
AATAATGTAG CCATGATTTT AGATGCGTTT TCAAAATCAA ATAAAGTGCT AAAATTCATA
GGAAATTGGG AGCATTCTGA ATTCTCTCGT AAATTGAGAG AAAAATATTC AACCTCAAAA
AATATTCAAC TTATTGATCC TATTTATGAT CTAGATACAT TGTTTAACCT TAGGAAGTCT
AGTTCTATTT ATATTCATGG TCACTCAGCT GGTGGGACTA ATCCCTCCCT AGTAGAGATG
ATGCATTTTG GAAAACCTAT TCTGGCGTTT GATTGTGATT TTAATCGTTA CACTACTGAT
AATAGTGCCA TTTATTTTAA GAGTTCTAGT GAGTTAATAG ATATTATTGA TAGTGAGCAT
TATACGCGGT TTGAAAAAGT TGGAAATAAG ATGGTTGAAG TAGCAAATCG ATGTTACAAG
TGGCAAAACG TTACGGAGCA GTATGAAAAA CTTTACTAA
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| Protein sequence | MRKVVVVGTV GIPACYGGFE SLVENLTKNS SAEIKYEVIC SSNSYPEKKI EYNGAKLSYI
PLSANGMQSI FYDIVSLIKC IFSRPDVVLV LGVSGCIFLP FFKLFSRARV ITNIDGLEWK
RDKWGSLPRK FLKISEKMAV KFSDVVVTDN KAISDYVLYE YGINSETIAY GGDHAIIGGQ
HHQNLSVQEY ALALCRIEPE NNVAMILDAF SKSNKVLKFI GNWEHSEFSR KLREKYSTSK
NIQLIDPIYD LDTLFNLRKS SSIYIHGHSA GGTNPSLVEM MHFGKPILAF DCDFNRYTTD
NSAIYFKSSS ELIDIIDSEH YTRFEKVGNK MVEVANRCYK WQNVTEQYEK LY
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