| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1370 |
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| Symbol | |
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| ID | 4923152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1580133 |
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| End bp | 1580579 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640162911 |
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| Product | flagellar export protein FliJ |
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| Protein accession | YP_001093498 |
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| Protein GI | 127512301 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2882] Flagellar biosynthesis chaperone |
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| TIGRFAM ID | [TIGR02473] flagellar export protein FliJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAAGC ATGACCCCTT AGAGACAGTA CTCAAGTTAG CCCTCGACGC CGAGGAGGCC
GCGGCGACTC AGCTAAGAGG CGTGCAGTTG ACGTTGAATA AATGTCGCCA GCAGCTCGAT
GCCTTGCAGC AGTATCGTCT CGATTACATG AAACAGATGG AGGCGCAACA GGGGCAAGTG
ATTGCCGCCA GCAGTTATCA TCAGTTTCAT CAGTTTATCC GTCAGATCGA TGAGGCGATC
GAGAAGCAGG TCTTCGCCGT GTCGGAGACG GATAAGCAGC GTCAGAAGGC CCAGCAATAT
TGGCAGGGTA AGCAACAAAA GCGCAAGGCT GTCGAGCTGT TACTCGCGCA TAAAGCCGAA
GCAAAACAAA AGTTTGAGGC TAAACAGGAA CAGAAGATGA TCGACGAGTT TGCCTCGCAA
CAATTTTTCC GCCAGTCTAC CCGTTAA
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| Protein sequence | MAKHDPLETV LKLALDAEEA AATQLRGVQL TLNKCRQQLD ALQQYRLDYM KQMEAQQGQV
IAASSYHQFH QFIRQIDEAI EKQVFAVSET DKQRQKAQQY WQGKQQKRKA VELLLAHKAE
AKQKFEAKQE QKMIDEFASQ QFFRQSTR
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