Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1363 |
Symbol | |
ID | 4921810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1572027 |
End bp | 1573115 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640162904 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_001093491 |
Protein GI | 127512294 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCGA ATCCAAAGGT GGCATATACA GCGCAGGCGC AGGTAACACT GGCTCCTTCC CAAGTCATGG GTGGTGAGGT GGCAAACGAT GCCATCTCCA GCCGCATGGA ACATATACTC CAGGCTATGC CATCGGGTGT AGTGATCCTC AATGGCGATG GTGTGGTGAC AGATGCCAAT CCGGTTGCGG TGCAATTGTT AGGGCAGCCC CTGGCGGGCA TACGCTGGTT ACAGGTGATT AACCGTGCCT TTTCGCCCCA AGATGACGAC GGTCACGAGG TCTCGTTGAA GAACGGTCGC CGGGTGAAGC TGGCGATCAC GCCGCTAACG CCCGAGCCTG GTCAGCTCAT CGTCTTGACC GACTTGACCG AAACCCGTCT GCTGCAGAAG AATCTCTCGC ATCTGCAACG ACTATCCGCC TTAGGTAAGA TGGTAGCCAG CCTGGCCCAC CAGGTGCGAA CACCTTTGTC GGCGGCCTTA CTCTACGCCG CGAACCTGGG GAGCCCTAAG CTGACCCAGG TCTCAAGGGA GCGTTTTCAG GGCAAGCTTA TCGACAGGCT CAATGAACTG TCGCAACAGG TGGATGACAT GTTGCTGATG GCCAAGGGGC GTCAGCAGGA ATTGACCGAA GTCTGCAACA TGCAGCAGGT GATGACTAGC GTGATGGCCA ACTGCGAACC TATCGCCGAG CGTAAGGGCT GCCAGCTGCT TCTTAAGCTA GACACTCACT TGCGCTTTAA GGCTAATCCG GCGGCGCTCA GCTCGGCGAT CAACAATCTT GTTATGAACA GTATCGAGGC CGGGGCCAGT CAGATCTGGC TTAATGCCCA AGATGAGACG GGGACTGTCG CCTTCGAGGT AGTCGACAAC GGTAAGGGGC TCGATGCCAA ATTGCAAGAG AAGGTGTTAG AGCCTTTCTT CACCACTAAG GCCCAAGGCA CAGGTCTGGG CTTAGCTGTC GTGCAGACGG TTGTGGCAAA TCATCAGGGC CGCTTGCAAC TCAATTGTAT CGCGGGAAAG GGATGTCGCG CCTCGTTTAA CCTGCCGGCT GTTTCGGCCG ATTCTGGGCT GGAGGTAAGC CATGGCTGA
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Protein sequence | MAANPKVAYT AQAQVTLAPS QVMGGEVAND AISSRMEHIL QAMPSGVVIL NGDGVVTDAN PVAVQLLGQP LAGIRWLQVI NRAFSPQDDD GHEVSLKNGR RVKLAITPLT PEPGQLIVLT DLTETRLLQK NLSHLQRLSA LGKMVASLAH QVRTPLSAAL LYAANLGSPK LTQVSRERFQ GKLIDRLNEL SQQVDDMLLM AKGRQQELTE VCNMQQVMTS VMANCEPIAE RKGCQLLLKL DTHLRFKANP AALSSAINNL VMNSIEAGAS QIWLNAQDET GTVAFEVVDN GKGLDAKLQE KVLEPFFTTK AQGTGLGLAV VQTVVANHQG RLQLNCIAGK GCRASFNLPA VSADSGLEVS HG
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