Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1348 |
Symbol | flgE |
ID | 4921511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1556368 |
End bp | 1557729 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640162889 |
Product | flagellar hook protein FlgE |
Protein accession | YP_001093476 |
Protein GI | 127512279 |
COG category | [N] Cell motility |
COG ID | [COG1749] Flagellar hook protein FlgE |
TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATTTA ACATTGCATT GAGTGGTATC GCAGCGGCGC AAAAAGATCT CAATACCACG GCGAATAACA TCGCCAACGT TAATACCACA GGCTTTAAGG AGTCGCGCGC CGAGTTCGCC GACGTGTATG CCAGCTCTAT CTTTGCCAAC AGCAAGACCA CAGTCGGTGG CGGTGTTACC ACGGCTCAGG TGGCGCAGCA ATTCCAGCAG GGCAGTCTGC AATTTACCAG CAACGCGCTG GATATGGCGA TCAATGGCGG CGGTTTCTTC GTAACCTCAT CAGAAGTGGG CTCGCAGGAT CTATCCTACA CCCGTGCCGG TGCCTTTAAG GTCGATGCCG ACAGCTATCT GGTGAACTCG GCCGGTAACT ACCTGCAGAC CTTCCCGGTG GACAAAGATG GCAACTCGAC CTCTGTGAGT CTGACAACTA CTCAGCCTGT GAAGATCCCT GACACTGCAG GTAGTCCACA GAAGACAGAC AATATCGGTA TTCAGATGAA CCTTAACGCG GGTGAGGGCA CGCTGGATCC GGCAAACTTT AATCCGAACG ACCCCGATAC CTACAATAAC TCGACGTCGG TCACCATGTA CGACTCACTG GGTGAGCCAC ATATTCTGAC CACCTATTTC GTGCGTCCAC CCGAGGCGGC TTACACAGGC ACCAGTAACT GGGTGGCCTT CTATGCGGTT GACGGCAAGC AGGTGGATTT GGCGGGCGCA GCGGGCACCT ATGGTCGTGA TACTACGGGT GACGGCGTTG CTGACTCGAC CGGCACAGCG GTTAACGCCA GCGGCTGGAA GGGCTCGGTT TTATCCTTCA ACGACACAGG AGCCTATACC GGCAGCGATC CTGCGGTGAT CACCACAGAG ACACTCGGTG TTGGCGGCGC TAATGTGTTA GGCCCAGGTA CAGATGGTAG CCAGACGCTT ACCCTTAACT TCAACAGCCC GACTCAGTAC GCCTCGCCAT TTGAGGTAAC CGAGCTGAGC CAGGACGGTA CCACAGTGGG TCGTCTGACT AACGTGGAAG TGGGCGCCGA TGGCTTGATT AACGCCAGCT ACAGTAACGG CTCTACCGTG CCTCTGGCGC GTGTCGCCCT GGCACGTTTC TCTAACGAGC AGGGCCTGAC TCAGGTGGGT AACACCTCCT GGAAGGAGAG CCTTGACTCG GGTCCGGCAC TGGCGGGTGA GGCCAACAGC GGCACCTTCG GTAGCATTCG CTCATCGGCG CTGGAACAGT CAAACGTCGA CCTGACCACA GAGCTGGTGG ACCTTATCTC GGCCCAGCGT AATTTCCAGG CGAACTCGCG TACCTTGGAA GTGAACAACA CCCTGCAGCA GACGGTACTG CAGATCCGTT AA
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Protein sequence | MSFNIALSGI AAAQKDLNTT ANNIANVNTT GFKESRAEFA DVYASSIFAN SKTTVGGGVT TAQVAQQFQQ GSLQFTSNAL DMAINGGGFF VTSSEVGSQD LSYTRAGAFK VDADSYLVNS AGNYLQTFPV DKDGNSTSVS LTTTQPVKIP DTAGSPQKTD NIGIQMNLNA GEGTLDPANF NPNDPDTYNN STSVTMYDSL GEPHILTTYF VRPPEAAYTG TSNWVAFYAV DGKQVDLAGA AGTYGRDTTG DGVADSTGTA VNASGWKGSV LSFNDTGAYT GSDPAVITTE TLGVGGANVL GPGTDGSQTL TLNFNSPTQY ASPFEVTELS QDGTTVGRLT NVEVGADGLI NASYSNGSTV PLARVALARF SNEQGLTQVG NTSWKESLDS GPALAGEANS GTFGSIRSSA LEQSNVDLTT ELVDLISAQR NFQANSRTLE VNNTLQQTVL QIR
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