Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1336 |
Symbol | |
ID | 4924386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 1546606 |
End bp | 1547901 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640162876 |
Product | hypothetical protein |
Protein accession | YP_001093464 |
Protein GI | 127512267 |
COG category | [S] Function unknown |
COG ID | [COG2604] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAGC TTTTTAATGC CAATCTCAAC ATCATCAGCC AGCGTTGGCC TATCATTGCC TCTGCACTTC AACACGCATC TTTCGATCAT TTAGATGCCG CTCTTGTTAC CGGCCAAACT CAAACCATTA GCGTTAATGG CATTCAACTA AGTAGCCGCC ACGATAGAAT GGCCGAAGCA CGTCTATTTA TCGAACAGCT TCCCAGCGGC TGCAAGCATG TCGCAGTGTA CGGTATCGGT ATGGGCGATG TACCTAGCTT GCTGATAGAT AATCCTCAAT TACAGCAAAT ACTTATCTGC CCACTAAATA TCGCGCTGTT TGCTTTATTG CTTTCTTACA CAGATCAGAG TGAATGGCTG AACGATAAAA GAGTCGTTTT GGTGCACCAA CTCGAGCAGA ACAAGCTGGC AACTCATTAT ATTGCCATTA CGCCCGACCT ACTCCTGATT GATGATGAAA ATGCAAAGTT AAGAGACCTA TTGGTCTTAG AAAATAATCG TGCATATGCC AACAAACACC ACACGATAGA CAATCCAGAA ATTCAGCAAC GTTTACTTGA AAACCTATCG GCAATTGAAC AGGATCCAGA TGCTGCAACG CTGAAAATGA CTCACCATCA ATCTCACGCT CATCTGATTG GAGCAGGCCC GACGCTAGAA ACACATTACT CCTATCTGCT CAGGCAACGC GCTCTGCCGA TTGGGCAACG CCCCTTGATG ATTGCCGTTG ATACATCATT AAAGGCGTTA ACTGAAAATA AAATCATTCC AGACATAGTA GTTTCTATTG ACAGTAAAAT AACATTGGAA CACTTCCCTG AAAACATACC GGAAGATATA ACCCTAGTTT ACTTTCCTAC ACTATCAAAA GAGGTGATAT CTAATTGGCC AGGCCCCAAA TTCAATGCCT ACTCAACCAG CCCTATTTAC GATCAATTAG CTAAGCACCA CCAAAAAATC AGGCTATTTA CCAACGGCAG CGTCATCCAC CCCGCGATTG ATCTGGCGGT AACATTGGGA ATCAAAGAAA TCACATTATT TGGCTGTGAT TTTTGTTACC CCAATAATAA AACCCACGCC CATTGGGAAG ACGGCATGTT AGGACCTTCG ACTCAATTGC AGAAAAAACA TTGGGTTCTC AATGGCCATG GCAAACGTGT CGCCACAGAT CTCAACTTTA GAGCTTATCT TCGCAGTCTG GAACACTATA TTCGCATTCA TCCCAAAGTG AAATTCTACC AATCGAGTTT AGAAGGGGCC AGAATAATTG GCGCACAGTA CAAGGAGTTA GTTTGA
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Protein sequence | MTELFNANLN IISQRWPIIA SALQHASFDH LDAALVTGQT QTISVNGIQL SSRHDRMAEA RLFIEQLPSG CKHVAVYGIG MGDVPSLLID NPQLQQILIC PLNIALFALL LSYTDQSEWL NDKRVVLVHQ LEQNKLATHY IAITPDLLLI DDENAKLRDL LVLENNRAYA NKHHTIDNPE IQQRLLENLS AIEQDPDAAT LKMTHHQSHA HLIGAGPTLE THYSYLLRQR ALPIGQRPLM IAVDTSLKAL TENKIIPDIV VSIDSKITLE HFPENIPEDI TLVYFPTLSK EVISNWPGPK FNAYSTSPIY DQLAKHHQKI RLFTNGSVIH PAIDLAVTLG IKEITLFGCD FCYPNNKTHA HWEDGMLGPS TQLQKKHWVL NGHGKRVATD LNFRAYLRSL EHYIRIHPKV KFYQSSLEGA RIIGAQYKEL V
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