Gene Shew_1335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1335 
Symbol 
ID4924111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1546346 
End bp1546609 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content46% 
IMG OID640162875 
Producthypothetical protein 
Protein accessionYP_001093463 
Protein GI127512266 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATATAA AAGAGACATA TGCAGTAATT ACAAGTGACT TTGTTGAAGC CGCTCACGCG 
TTTCGATTAG GCCAGGAAGC AGAAGGCTCT CAGCGGTTGC GCGAAGGACT AGATCTATTA
GAACCCCTTC TCAGCTCACA CCCAAAGGCA CAAGTGATTT TTCAATTGAT TCCTAATATG
CTAGCAGCTC AGGAGCGCCA TGACTGGTTA GGGCTTGCGG ACTACTTAGA ACACGAATTA
AGCGCGCTAT TGAGCCAGAC TTAG
 
Protein sequence
MNIKETYAVI TSDFVEAAHA FRLGQEAEGS QRLREGLDLL EPLLSSHPKA QVIFQLIPNM 
LAAQERHDWL GLADYLEHEL SALLSQT