| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1313 |
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| Symbol | |
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| ID | 4920485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1525070 |
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| End bp | 1525681 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640162853 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001093441 |
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| Protein GI | 127512244 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTACAAA CACCCCTTAG CCGCAGTGAA CAGAAGAAGG CGCAGATATT ACACGCCGCG
ATTGAGCTCT TCTGTGGGCA AGGATTTCCC AATACCAGCA TGGATGAGGT CGCGAAGTTG
GCGGGCGTCT CTAAACAGAC TGTCTATTCG CATTTTGGCA GCAAGGATGA TCTGTTCGTT
GCATCAATCG AATCTAAGTG TGTTGTGCAT CAGGTGACGG CGGAGCTGTT TACCAGCCCC
CAGGACCCTG AGCAGGCGCT GCTGCATTTC GGTAACTATT TTGGCGAGAT GATAGTATCG
CCCGAGGCGA TAGAGGTGTT TAAGACCTGT GTGGCCCAGG CCGATACCCA CCCGGAAATT
TCGGCGCTGT TTTTTAATGC CGGTCCAGAG TTTCTGCTCA ATCTGCTGGA GAACTATTTC
GAGCAGGTGG AGAAACTCGG CGAGTATCAT TTTGGCGATC TGCGCCATGC CTCGGTGCGT
CTGTGTATGA TGCTGTTTGG CGAGATGCGT CTCAAGCTAG AGCTAGGCTT ACCGGTCGAG
GATCTGATTG CTAAGCGCCC GGCCTACATC AAAGAAACGG TGAGCATGTT CCTGCGTGCC
TATCGTGTTT AG
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| Protein sequence | MVQTPLSRSE QKKAQILHAA IELFCGQGFP NTSMDEVAKL AGVSKQTVYS HFGSKDDLFV
ASIESKCVVH QVTAELFTSP QDPEQALLHF GNYFGEMIVS PEAIEVFKTC VAQADTHPEI
SALFFNAGPE FLLNLLENYF EQVEKLGEYH FGDLRHASVR LCMMLFGEMR LKLELGLPVE
DLIAKRPAYI KETVSMFLRA YRV
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