| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1302 |
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| Symbol | |
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| ID | 4920445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1509487 |
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| End bp | 1511043 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640162843 |
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| Product | cytochrome bd ubiquinol oxidase, subunit I |
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| Protein accession | YP_001093431 |
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| Protein GI | 127512234 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000643415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGTTG AAGAGGTTGT AGAGCTCTCG CGCTTACAGT TTGCGCTGAC AGCTATGTAT
CACTTCCTGT TTGTACCTTT GACCTTGGGG CTGGCGTTCT TGCTGGCCAT TATGGAATCA
CTCTATGTGA TGACCAATAA GCAGATCTAT AAAGATATGA CCAAGTTCTG GGGTAAGCTT
TTTGGTATTA ACTTCGCCCT GGGCGTAACC ACAGGTCTGG CGATGGAGTT CCAGTTCGGA
ACCAACTGGT CATACTATTC TCACTATGTG GGTGACATCT TCGGTGCGCC ACTGGCTATC
GAAGGCTTGA TGGCCTTCTT CCTCGAATCT ACCCTGGTGG GTATGTTCTT CTTCGGTTGG
GACAGATTCA GCAAGCGTCA ACACCTGGCG GTCACCTGGT TGGTGGCCCT GGGCTCGAAC
ATGTCGGCGC TGTGGATCTT GGTCGCCAAC GGTTGGATGC AGAACCCAGT AGGTAGTGTG
TTCAACTACG AAACCATGCG TATGGAGATG ACCAGCTTCG CCGAGGTGCT GTTCAACCCG
GTTGCCCAGG TGAAGTTTGT TCATACCGTG GCGTCTGGCT ATGTGGCCGG CGCCATGTTT
GTTCTGGCCA TCAGTTCTTA CTACATCCTA AAGAAGCGTG ACCTGCCGTT TGCCCGTCGC
TCATTTGCCA TCGCGGCAAG CTTCGGTATG GCGTCTATCC TGTCGGTCAT CGTACTGGGT
GACGAGTCAG GTTATAAGGT GGGTGAGGCC CAGCGCGTTA AGCTAGCGGC TATCGAAGCC
GAATGGCACA CAGAACCTGC ACCTGCGGCC TTTACCGCGG TGGGTTTCCC GAATCAGGAA
ACCATGCACA CCGATTACGC CATCAAGATC CCATACGCCA TGGGTATCAT CGCCACCCGT
TCTATCGATG AAGAGGTGAC CGGTATCCGC GACCTTATCG TCGAGCACGA GGAGCGTATT
CGCAACGGTA TGAAGGCTTA TGCCATGTTG ACCGAGCTGC GCGCCGGCAA GGAAACCCCT
GAGCTGCGTG CCGCCTTCGA AGAGGCAAAA GTCGACCTGG GTTATGGCCT GCTGCTGAAG
CGTTACACAG ACAATGTGGT CGATGCGACA GAAGAGCAGA TCAAGGCCGC GGCCAAAGAC
TCTATCCCAT CGGTTGCCCC TATGTTCTGG AGCTTCCGTG TGATGGTTGG CCTGGGTGTC
GTCATGCTGT TCGTGTTTGC GGCGGCCTTC TGGCAGAGCA CACGTCATCA GATCGAAGAG
AAGCCTTGGG TACTTAAGGC GGCGCTGTAC AGCCTGCCAC TGCCTTGGAT CGCCATCGAG
TGTGGTTGGT TCGTCGCCGA GTACGGTCGT CAGCCTTGGA CCATCTCCGA GGTGCTGCCA
ACCTTCATGT CGGCGTCTAG CCTAACGGCT GCGGATCTCT GGTTCAGTAT CATCTCTATC
ACGCTCTTCT ATACAGTTCT GCTGGTGATT GAGCTGTTCT TGATGATCAA GTTTGCACGT
AAGGGACCTA GCAGTCTCAA GACGGGCCGT TATCACTTTG AAAACCTAGA AGCTTAA
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| Protein sequence | MIVEEVVELS RLQFALTAMY HFLFVPLTLG LAFLLAIMES LYVMTNKQIY KDMTKFWGKL
FGINFALGVT TGLAMEFQFG TNWSYYSHYV GDIFGAPLAI EGLMAFFLES TLVGMFFFGW
DRFSKRQHLA VTWLVALGSN MSALWILVAN GWMQNPVGSV FNYETMRMEM TSFAEVLFNP
VAQVKFVHTV ASGYVAGAMF VLAISSYYIL KKRDLPFARR SFAIAASFGM ASILSVIVLG
DESGYKVGEA QRVKLAAIEA EWHTEPAPAA FTAVGFPNQE TMHTDYAIKI PYAMGIIATR
SIDEEVTGIR DLIVEHEERI RNGMKAYAML TELRAGKETP ELRAAFEEAK VDLGYGLLLK
RYTDNVVDAT EEQIKAAAKD SIPSVAPMFW SFRVMVGLGV VMLFVFAAAF WQSTRHQIEE
KPWVLKAALY SLPLPWIAIE CGWFVAEYGR QPWTISEVLP TFMSASSLTA ADLWFSIISI
TLFYTVLLVI ELFLMIKFAR KGPSSLKTGR YHFENLEA
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