| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1298 |
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| Symbol | guaA |
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| ID | 4920423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1500113 |
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| End bp | 1501690 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640162839 |
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| Product | GMP synthase |
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| Protein accession | YP_001093427 |
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| Protein GI | 127512230 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0518] GMP synthase - Glutamine amidotransferase domain
[COG0519] GMP synthase, PP-ATPase domain/subunit |
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| TIGRFAM ID | [TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit
[TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACA TTCATGATCA TAAGATCCTC ATACTCGATT TTGGATCTCA GTACACGCAA
TTGATTGCCC GCCGTATCCG TGAGATCGGT GTCTACTGTG AGCTTTGGGC CTGGGATGTG
TCTGAAGAGC AGATCAAAGC CTTTGCGCCT AACGGCATCA TCTTGGCCGG TGGCCCAGAA
AGCGTTACCG CCGACAACTC GCCTCGTGCA CCTGAATATG TGTTTAACGC CGGCGTACCT
GTACTCGGCA TCTGCTACGG CATGCAGACC ATGTCAGAGC AGCTGGGGGG CAAGGTGATC
CAAGGCGTAG GCGAAGGTGA ATTCGGTTAT GCTCAGGTAG AAGTTCAGGC AGCATCTGAG
CTGTTCAAGA GCATCGAAGA TGCGGTCAGC GACAGCGGCA AGGCGCTGCT TGACGTCTGG
ATGAGCCATG GTGACAAGGT TTCTGAGATC CCTGAAGGTT TCGTGACAGT GGCTAAGACA
GACACCTGTC CTTACGCCGC AATGGCCAAC GAAGAGAAGC GTTTCTACGG CGTTCAGTTC
CACCCAGAAG TAACCCACAC CCGTCAGGGC AAGCGGATGC TCGAGCATTT CGCTCTGGAT
ATCTGTCAGT GTGAGGCCAA CTGGAAACCT TCTTCTATCA TCGAAGACGC GGTTGCTCGT
ATCAAGGAGC AGGTCGGCGA TGACGAGGTT ATCCTAGGTC TGTCTGGTGG TGTGGACTCC
TCCGTTGTGG CCATGCTGCT GCACCGCGCC ATCGGCAGCA AGCTGACCTG TGTGTTTGTG
GACAACGGTC TGCTGCGTCT GAACGAGGCC GACCAGGTAC TTGAGATGTT TGGCGACCAC
TTCGGTCTCA ATATCGTTCA CGTCGACGCC GAATCGCGCT TCCTCGACGC ACTGGCCGGT
GAAGCCGAGC CAGAAGCCAA GCGTAAGATC ATTGGCAAGG TGTTTGTCGA TATCTTCGAC
GAAGAGTCAC GCAAGTGCGT TAACGCCAAG TGGCTGGCCC AAGGCACCAT CTATCCAGAC
GTTATCGAGT CTGCAGGCAG TGCTACCGGT AAGGCCCACG TGATCAAGTC ACACCATAAC
GTTGGTGGTC TGCCGGATGA TATGGAGCTG GGTCTGGTCG AGCCGCTACG CGAGCTGTTT
AAAGATGAAG TGCGTAAGAT AGGTCTCGAG CTGGGTCTGC CGTACAACAT GCTTTACCGT
CACCCATTCC CTGGCCCAGG CCTGGGGGTA CGTGTACTGG GCGAAGTGAA GAAAGAGTAC
TGTGACCTGC TGCGCCGCGC CGATGCTATC TTCATCGAAG AGCTGCACAA GGCTGACTTG
TACAACAAGG TGAGCCAGGC CTTTACCGTC TTCCTGCCGG TTCGTAGTGT TGGCGTGATG
GGCGATGGTC GTAAGTACGA CTGGGTAGTA TCCCTGCGTG CGGTAGAAAC CATCGACTTC
ATGACGGCGC ACTGGGCACA TCTGCCATAC GATTTCCTCG GCAGAGTCTC AAACCGTATC
ATCAATGAGA TCGACGGCAT CTCTCGTGTG GTTTACGATA TCTCAGGTAA GCCACCTGCA
ACCATCGAGT GGGAATAA
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| Protein sequence | MSNIHDHKIL ILDFGSQYTQ LIARRIREIG VYCELWAWDV SEEQIKAFAP NGIILAGGPE
SVTADNSPRA PEYVFNAGVP VLGICYGMQT MSEQLGGKVI QGVGEGEFGY AQVEVQAASE
LFKSIEDAVS DSGKALLDVW MSHGDKVSEI PEGFVTVAKT DTCPYAAMAN EEKRFYGVQF
HPEVTHTRQG KRMLEHFALD ICQCEANWKP SSIIEDAVAR IKEQVGDDEV ILGLSGGVDS
SVVAMLLHRA IGSKLTCVFV DNGLLRLNEA DQVLEMFGDH FGLNIVHVDA ESRFLDALAG
EAEPEAKRKI IGKVFVDIFD EESRKCVNAK WLAQGTIYPD VIESAGSATG KAHVIKSHHN
VGGLPDDMEL GLVEPLRELF KDEVRKIGLE LGLPYNMLYR HPFPGPGLGV RVLGEVKKEY
CDLLRRADAI FIEELHKADL YNKVSQAFTV FLPVRSVGVM GDGRKYDWVV SLRAVETIDF
MTAHWAHLPY DFLGRVSNRI INEIDGISRV VYDISGKPPA TIEWE
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