Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1249 |
Symbol | |
ID | 4923555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1446672 |
End bp | 1447769 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640162789 |
Product | phosphoribosylaminoimidazole carboxylase, ATPase subunit |
Protein accession | YP_001093378 |
Protein GI | 127512181 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATCG GCATTATCGG TTGTGGTCAG CTGGCGCGCA TGATGGCGCT GGCGGGCATT CCATTAGGGC TGAAATTTAG CTTCGTCGCC GATGGTGGCC CTGATACGGA TCTCAGCTGT GTCGAGGGGC TCGGCCCTGT GGCGCCCTGG CAGCCGGGCC AGAGTGTCAG CGCACTCTAT GAAGCCTTGG GAAAACCAGA GGTGATCACG GTCGAAAAAG AACAGGTAGA TCTCGAGCTT GTTCGCGCCC TCGAAGCCCA CTGCATCATT AGACCGAATG TCGATAGCAT CGCCAAGTGC AAGAGCCGTA TTCACGAGAA GCAGCTATTA GCCGAGCTTG GTATTCCCTG CGCGCCCTTT ACCTATGATG TCAGCCTCGA GGAGAGCGCC AAGACCTTAG ATTATCCTAT GGTGATCAAG TCCCTCGATG AAGGCTATGA CGGTAAGAAC CAATGGGTGG TGCGCAGCAA TGATGATCTT GTCAGCGTTG CGCCTAATCT TAAACAAGGT CATTACCTAG CGGAGCAGTG GATTCCTTTT GATGCAGAGG TGTCTATCAT AGGTGTGCGC GGCGCCAGCG GCGAGGTGAG CTGTTACCCC CTGACCGAGA ATCAGCATCA AAATGGGATT CTGGTGCGCT CAATGGCGCC TGCCAGAGGA CTAAGCGGCG AGATGGTGCA GCAGGCGCAA AGCTATATGA CCAAATTGCT GCAAGCCCAA GAGTATGTTG GTGTGCTCGC CATGGAGCTG TTTGTGCTGG GTGATAAGCT GCTGGTGAAT GAGTTAGCAC CTCGGGTACA CAACAGCGGC CACTGGACTC AGCTCGGCGC TCAAACTTGC CAGTTTGAGA ATCACATCCG CGCCGTCGCC GGACTCGCCC TGGGGGCAAC CTCGGCCATA GGTAAGACCG GCATGCTGAA TCTGTTAGGT GTCGTTGCTC CGCCAATGGA CGCCCTAAGC AGCAATGCCA GCCTGCACTG GTATAACAAG GCCGCCAAGC CCAACCGCAA GTTAGGACAC ATCAACTTCA TGCTGGATGA CTACGCCCAA CTGGTTAGCC AGATGCAAAG CGTCGAGCAG TCGCTGGTGA AGTGCTAA
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Protein sequence | MRIGIIGCGQ LARMMALAGI PLGLKFSFVA DGGPDTDLSC VEGLGPVAPW QPGQSVSALY EALGKPEVIT VEKEQVDLEL VRALEAHCII RPNVDSIAKC KSRIHEKQLL AELGIPCAPF TYDVSLEESA KTLDYPMVIK SLDEGYDGKN QWVVRSNDDL VSVAPNLKQG HYLAEQWIPF DAEVSIIGVR GASGEVSCYP LTENQHQNGI LVRSMAPARG LSGEMVQQAQ SYMTKLLQAQ EYVGVLAMEL FVLGDKLLVN ELAPRVHNSG HWTQLGAQTC QFENHIRAVA GLALGATSAI GKTGMLNLLG VVAPPMDALS SNASLHWYNK AAKPNRKLGH INFMLDDYAQ LVSQMQSVEQ SLVKC
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