| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1211 |
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| Symbol | |
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| ID | 4923530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1405099 |
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| End bp | 1405749 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162745 |
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| Product | protein-L-isoaspartate O-methyltransferase |
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| Protein accession | YP_001093340 |
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| Protein GI | 127512143 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
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| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATAGAG CAATTATGAA TGGGGTAGCC ACTACGGCGG CATTGAATCT GGCACGTCAC
CTTCAGGGGG CGGGGATAAC TAATGCCGAA GTTTTAGCTG TGGTGGCGAA AACGCCAAGA
GAATTGTTTC TCGATGCGGC CCTAGGCCAT AAGGCCTATG AAAATACTGC TCTGCCCATA
GGACAGGGGC AAACCATCTC TCAGCCCTAT ATCGTGGCGC GTATGACTGA ACTTTTGTTA
GAGTCGCGTC CTAAAAGGGT GCTGGAGATA GGCACAGGCT CTGGCTATCA GGCGGCTATT
TTGGCGCAAT TGGTGGATGA GCTCTGTACG GTAGAGCGAA TAAAGAGTTT GCAGATCCAG
GCGCGCCAGC GTCTCAAGCG GCTCGATCTG CATAATGTCT CCTTTAAGTA TGGCGACGGC
TGGCAGGGCT GGGCCAACAA GGGCCCCTTC GACGCCATCA TGGTGACGGC GGCGGCCAGC
AGCGTGCCGC AGGCGCTGCT GCAACAGCTG GCGGACGGTG GCGTGCTGGT GATCCCTGTC
GGCGAGGAGA CGCAGCAACT GATGCGTGTG GTTCGCATGG GCGATCAATT TCATTCCCAG
ACCATAGAAA TGGTGAAGTT TGTGCCTTTG GTCAACGGTG AACTCGCCTA G
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| Protein sequence | MDRAIMNGVA TTAALNLARH LQGAGITNAE VLAVVAKTPR ELFLDAALGH KAYENTALPI
GQGQTISQPY IVARMTELLL ESRPKRVLEI GTGSGYQAAI LAQLVDELCT VERIKSLQIQ
ARQRLKRLDL HNVSFKYGDG WQGWANKGPF DAIMVTAAAS SVPQALLQQL ADGGVLVIPV
GEETQQLMRV VRMGDQFHSQ TIEMVKFVPL VNGELA
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