Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1192 |
Symbol | |
ID | 4922580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1383674 |
End bp | 1384645 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640162726 |
Product | thiamine-monophosphate kinase |
Protein accession | YP_001093321 |
Protein GI | 127512124 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0611] Thiamine monophosphate kinase |
TIGRFAM ID | [TIGR01379] thiamine-monophosphate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0510899 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTCTTA AGACTGTGAA AGAGTTTAAA TTAATCGATC ATTTCTTTGC TAACCTTGGC CAGACCCGCC GCGATGTGCA CCTGGGGATC GGCGACGACT GCGCCCTGGT CCAGCCCGCC GAGAACAAGG TGATTGCCAT CTCCTGCGAC ACCCTGGTTG AAAATGTACA CTTCTATGCC GACATGCCCG CCAAGGCACT GGGTTACAAG GCGCTGGCGG TTAACCTGTC GGATCTCGCC GCCATGGGCG CAGAGCCCGC CTGGATGACG CTTGCCCTTA CCCTACCTGA GGTGGATGAG ACCTGGCTGG AGGAGTTTAG TCAGGGACTG AATGAGGCGG CGCAGTATTA CGGCGTTGCC CTGGTGGGCG GCGATACTAC CCGCGGCCCC AAGTCGATCA CCATCACCAT CAATGGCCAA GTGCCAGAGG GCAAGGCCCA TACAAGGGGC GGCGCCAAGA ATGGCGACTG GATCTATGTG ACCGGCTCCC TCGGTGATTC GGCCGTGGGG TTGGCGATTC TGGGTGATAA GCTCAATATC GACGGGGAGG CGAGGGAGTA TTTTATTCAA CGCCACTATT TCCCAACCCC AAGAGTGCTT GCGGGTCAGT CGCTTAGAGG ATTGGCCTCG AGCGCCATCG ATCTCTCCGA TGGTTTTGTC TCGGATATCG GTCATATCCT CAAGCGCTCG GCGGTGGGTG CCGTGGTGGA TGTGGATCGT CTGCCCCTGT CGGCTCAGAT GCGTGAATCT TTGGCTGAGA CCGAGGCGCT GGGTTATGCC CTAACGGGTG GTGAGGATTA CGAGCTGCTG TTTACCGTCC CGGAGGCTCA ACGTGGCGCG CTGGAGACGG CCCTGGCCCA TGCCGGTGTG AGCTTTACAC AGGTTGGTCA GATCGGCACT GGCGATAAGC TGCGCCTCAT CAAGGATGGC GAGCCCTACA CACCGACTCA ATTTGGTTTC GAGCACTTTT AA
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Protein sequence | MVLKTVKEFK LIDHFFANLG QTRRDVHLGI GDDCALVQPA ENKVIAISCD TLVENVHFYA DMPAKALGYK ALAVNLSDLA AMGAEPAWMT LALTLPEVDE TWLEEFSQGL NEAAQYYGVA LVGGDTTRGP KSITITINGQ VPEGKAHTRG GAKNGDWIYV TGSLGDSAVG LAILGDKLNI DGEAREYFIQ RHYFPTPRVL AGQSLRGLAS SAIDLSDGFV SDIGHILKRS AVGAVVDVDR LPLSAQMRES LAETEALGYA LTGGEDYELL FTVPEAQRGA LETALAHAGV SFTQVGQIGT GDKLRLIKDG EPYTPTQFGF EHF
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