| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1157 |
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| Symbol | |
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| ID | 4921558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1329935 |
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| End bp | 1331572 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162691 |
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| Product | alkaline phosphatase |
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| Protein accession | YP_001093286 |
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| Protein GI | 127512089 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1785] Alkaline phosphatase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00798229 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAATAAGA AACTACTAGT ACTGTCTCTA GCAGCCATTC TCGGCCTAGC GGCTTGTGGT
AGCGACGGTG ATAACGGTAA AGATGGCACC GCGGGTACGC CAGGTACCGA CGGTAGCAAC
GGCACTAACG GCAAAGACTG GACCGGCGTT AACCAATGGT ATGTCGATGG CCAAAACCGC
GTCACTAAGG CGTCGGGCAT GACCAACAAC AATGAGGCAG GCGCCGCCAA GAACATCATT
CTGTTTGTGG GCGACGGCAT GGGCGTGTCA ACCGTGACGG CGGCGCGCAT CCTCGACGGT
CAGCTAAAAG GTCAGACAGG TGAAGAGAAC TCACTCTCTT TCGAGACCCT GCCTCACCTA
GGCCTGGCTA AGACCTATAA CGTCGATGGC CAAACGCCAG ACTCTGCCGG CACCATGACC
GCCATGGTCA CAGGTGTGAA GACAGACGTA GGCGTGATCT CTCAGGGTGA AGGCGTCGAG
CGCGGTGTCT GTTCATCAAC TACAGGCCAA GATCTGGTCA CCTCGCTGGA ACTGGCCGCC
ATGGCGGGCA TGTCTACCGG TGTGGTCTCT ACCGCCCGTA TCACTCACGC CACCCCTGCG
GCGACCTATG CCCACGTGCC AGAGCGTGAT TGGGAAGCAG ACAGCAACCT GCCGGCCGAA
GCCGTTACCA ATGGCTGTAA AGACATTGCC GCCCAGATGC TGGACTTCAA CGACGGTAAG
GGGATCAACG TGGTCATGGG TGGCGGTCGT CGCGCCTTCA TCCCTAACAC CACTGTCGAT
CCAGAAGGCA AGGCGGGTAA GCGTAAAGAT GGTCGTGACC TGACCGCCGA GTGGATGGCG
CAGTACCCTA ACGCCGCCTA TGTTACCGAC CGTGACAGCT TCCTGGCCAT GGACACAAGC
ACTACAGAGC ACGCCCTGGG TCTGTTCAAC TCGTCTCACA TGGAATATGA CTACGACAGA
GTCGAAGATG GCGTAAACGG CGAGCCTTCA CTTGCAGAGA TGACGGCTAA GAGTATCGAC
ATTCTGAGCA AGAACGACAA AGGCTTCGTG CTGATCGTCG AAGCCGGTCG TATCGACCAC
GCTCACCATG CCGGTAACGC GGCCCGTGCC CTGCACGACA CCATCGCTCT GTCTGAGGCA
GTACGTGTGG CCATGGAGAA AACTTCGGCT AACGACACCC TGTTGATGGT GACCGCCGAC
CACAGCCACG TGTTCACCAT CGCAGGTTAT CCAACCCGTG GTAACCCTAT CCTGGGTCTG
GTTAAGAGCA ACGACTCAAA CGGTCAGCCG TCTGTGACTA ACTCTACCGA TGCCAACGGC
ATGCCATACA CCACTGTCGG CTATGCCAAC GGTCTGGGCT TTGGCTCACT GGAAACTGGT
GGCGACGAGC GTTACAACTA CGCTGCCGAG CCTGGTCGTG TGGATCTGAA CTACATAGAC
ACCCAGAGTG CCGGTTTCCA CCAGGAAGCC CTGGTACCGC TGGAAAGCGA AACCCATGCC
GGTGAAGATG TGGCCATCTT CGCTCGTGGC CCAGGTGCAA GCCTGGTTGA GGGTACCGTA
GAGCAGAATC ACATCTTCCA TGTGATGAAC TATGCCGGTG ACCTGGTCAA GAAGGCAGAA
GCCGCCGCGG CGCAATAA
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| Protein sequence | MNKKLLVLSL AAILGLAACG SDGDNGKDGT AGTPGTDGSN GTNGKDWTGV NQWYVDGQNR
VTKASGMTNN NEAGAAKNII LFVGDGMGVS TVTAARILDG QLKGQTGEEN SLSFETLPHL
GLAKTYNVDG QTPDSAGTMT AMVTGVKTDV GVISQGEGVE RGVCSSTTGQ DLVTSLELAA
MAGMSTGVVS TARITHATPA ATYAHVPERD WEADSNLPAE AVTNGCKDIA AQMLDFNDGK
GINVVMGGGR RAFIPNTTVD PEGKAGKRKD GRDLTAEWMA QYPNAAYVTD RDSFLAMDTS
TTEHALGLFN SSHMEYDYDR VEDGVNGEPS LAEMTAKSID ILSKNDKGFV LIVEAGRIDH
AHHAGNAARA LHDTIALSEA VRVAMEKTSA NDTLLMVTAD HSHVFTIAGY PTRGNPILGL
VKSNDSNGQP SVTNSTDANG MPYTTVGYAN GLGFGSLETG GDERYNYAAE PGRVDLNYID
TQSAGFHQEA LVPLESETHA GEDVAIFARG PGASLVEGTV EQNHIFHVMN YAGDLVKKAE
AAAAQ
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