Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1123 |
Symbol | |
ID | 4921084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 1298053 |
End bp | 1299159 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640162658 |
Product | A/G-specific adenine glycosylase |
Protein accession | YP_001093253 |
Protein GI | 127512056 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1194] A/G-specific DNA glycosylase |
TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000383287 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATTTT GGTTGAGAAA AACCTTGCCC CTCTATAGAC TGAGCGCCAT GAAAACAGAG CAATTTCACC AGCGCATCGT CACCTGGTAC GACAAACACG GACGCAAGCA TCTTCCCTGG CAACAAGATA AGACCCCTTA TAAGGTATGG GTGTCCGAGA TCATGTTGCA ACAGACTCAG GTTGCCACAG TTATCCCCTA CTTCGAAGCC TTTATGGCGC GCTTCCCCAC TATCTTGGAC TTGGCAAATG CCGATCAGGA TGAGGTGCTG CACCACTGGA CCGGCCTAGG CTATTACGCC AGGGCGCGTA ACCTACATAA GAGTGCCCAG CTGATCGCCA GCGACTATGA TGGTGTCTTC CCAACCCAAT TCGAGCAGGT ACTCGCCCTA CCGGGTATTG GCCGCTCGAC CGCTGGGGCG GTACTCTCAC TCTCTCTTGG ACAACATCAC CCCATATTAG ATGGCAACGT CAAGCGAGTG CTCGCAAGAC ATGGCGCCAT AGCTGGCTGG CCCGGCAAAC GCGAGGTGGA GCAGCAGCTA TGGCAGCTCA CCAACAGCCT GACCCCTAAG ACAGGCGTAA CCCAATATAA TCAGGCGATG ATGGATATTG GCGCCAGTAT CTGCACCCGC TCTAAGCCCA GGTGCGAGCT CTGCCCCGTC GCCATCGACT GTAAGGCGCA GCTGATGGGC CGCCAGACTG AGTTTCCCGG CAAGAAACCG AAGAAGACGA TTCCGGAAAA GCTCGGCTAT ATGCTAGTGA TTAAAGATGA CGATAGGGTG CTGATGAGCA AACGCCCACC TGCGGGGATC TGGGGCGGGC TCTGGTGCTT CCCACAGTTT GACAGCCAGG AGGCGCTCGA GGAGTTTGCC AAAACAAACG GCCTAACTCT TATTAGTGAG GAGCCCATAG ACAGTTTTCG TCACACCTTC AGCCATTTCC ATCTGGATAT CAGCGCCTTT GTGGCACACC AAACCACAAG CGCACATGAG ATCATGGAAG AGAGCGGCTC TCTCTGGTAT AACATAGCCA AGCCACCCAA GGTTGGTCTG GCCGCCGCCA CAGAGCGGAT CCTCGCCAGC TTAGGTTCAG TATCAAATAA GGAGTAA
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Protein sequence | MPFWLRKTLP LYRLSAMKTE QFHQRIVTWY DKHGRKHLPW QQDKTPYKVW VSEIMLQQTQ VATVIPYFEA FMARFPTILD LANADQDEVL HHWTGLGYYA RARNLHKSAQ LIASDYDGVF PTQFEQVLAL PGIGRSTAGA VLSLSLGQHH PILDGNVKRV LARHGAIAGW PGKREVEQQL WQLTNSLTPK TGVTQYNQAM MDIGASICTR SKPRCELCPV AIDCKAQLMG RQTEFPGKKP KKTIPEKLGY MLVIKDDDRV LMSKRPPAGI WGGLWCFPQF DSQEALEEFA KTNGLTLISE EPIDSFRHTF SHFHLDISAF VAHQTTSAHE IMEESGSLWY NIAKPPKVGL AAATERILAS LGSVSNKE
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