| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1097 |
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| Symbol | |
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| ID | 4923465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1264478 |
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| End bp | 1266037 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640162630 |
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| Product | integral membrane protein MviN |
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| Protein accession | YP_001093227 |
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| Protein GI | 127512030 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
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| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000276911 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0876862 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCAAGA AACTATTTAA GTCAGGCATG ATCGTGAGTG CTATGACGCT GATTTCTCGT
GTTTTAGGCT TAGTGCGAGA CGTGGTTATC GCCAATTTGA TGGGGGCCGG GAGTAGCGCC
GACGTCTTCT TTTTTGCCAA CAAGATCCCA AATTTTTTAC GCCGATTATT TGCCGAAGGT
GCCTTCGCCC AGGCCTTCGT GCCTGTCTTG ACCGAATATC AAGAGAAACA TGACGACCAG
GCGGTTCGCG AGTTGCTCGC CAAGGTGGCC GGTACGCTCG GGCTGGTGGT GACCTTGGTG
ACTCTGATGG GGGTGATCGC CTCGCCACTA TTAACGGCCC TGTTTGGCGG CGGTTGGTTC
CTGGCCTGGC TAAACGATGA GCCAAATGGT CAGAAATTTG AGCTGGCATC ACTAATGCTG
AAGATCACCT TTCCCTATCT CTGGTTTATT ACCTTTACCG CCTTGGCGGG ATCGATACTC
AACACACGTG GCCGATTTGC GGTATCGGCC TTTACCCCGG TGTTTTTAAA TGTGGCCATC
ATCAGTGCGG CGCTGTTTCT GGCGCCTAAG CTCGATCAGC CGGAGATAGG CCTTGCTTGG
GGCGTTTTCG CCGGTGGCCT GATCCAGTTT TTATTCCAAA TTCCTTTTCT ATTTAGAGAG
AAGGCCTTGG TTAAGCCGTC GTGGGGTTGG CATCACCCGG GCGTCGTTAA GATCCGCACC
CTGATGCTGC CCGCGCTGTT TGGCGTGTCT GTGTCGCAGA TCAATCTGCT GCTCGATACC
TTTATTGCCA GTTTCTTGGT GACGGGCTCC ATCAGCTGGC TCTACTACTC AGATCGACTG
CTGGAATTCC CCTTAGGTCT GTTTGGTATC GCCATCGCTA CCGTTATCTT GCCGGCGCTG
TCGAAGAAGC ATGTTAACGC CGAGGGGGAT GGTTTTGCCA AAACGATGGA TTGGGGGATC
AAGGCGATTT TGCTGATGGG GGTGCCTGCC ATGTGCGGCC TGATCGTCTT GGCAAAGCCC
ATGTTGATGG TGCTCTTCAT GCGCGGCGCC TTCACGCTAG ATGATGTGGA TATGGCCTCT
TATAGTTTAA TGGCCTATGG TTCGGGGCTG CTGAGTTTCA TGCTGATCAA GGTGCTGGCG
CCGGGCTATT ACTCCCGTCA GGATACCAAA ACCCCTGTGC GTTACGGCAT AGTCGCCATG
GTGAGTAACA TGGTGTTTAA CCTGATTTTT GTGTTTCCAT TCGGTTATGT GGGCTTGGCG
ATTGCCACCT CGTTATCGGC GCTGCTCAAT GCAAGTCTGC TTTACCGCGG CCTGCATCGC
GCGGGGGTGT ACCAAATTCC TCGTCAGACC TTTGTGTTTA TGGGCAAAAC TTTGGTTGCC
GCCGCGCTGA TGATCGCCGT GCTTTATCTA TTGTTGCCTA GCATTGATAC CTGGCTAGCG
CTTTCATTTA TGGGCAGGGC AACTCAGCTG GCCTATTTGA TTGGTGCAGG GGCTGTGGTC
TACCTGTTGG CTATGTTATT GTTAGGAATT CGCCCCTGGA GGATGAAAGC TGGCTTTTGA
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| Protein sequence | MSKKLFKSGM IVSAMTLISR VLGLVRDVVI ANLMGAGSSA DVFFFANKIP NFLRRLFAEG
AFAQAFVPVL TEYQEKHDDQ AVRELLAKVA GTLGLVVTLV TLMGVIASPL LTALFGGGWF
LAWLNDEPNG QKFELASLML KITFPYLWFI TFTALAGSIL NTRGRFAVSA FTPVFLNVAI
ISAALFLAPK LDQPEIGLAW GVFAGGLIQF LFQIPFLFRE KALVKPSWGW HHPGVVKIRT
LMLPALFGVS VSQINLLLDT FIASFLVTGS ISWLYYSDRL LEFPLGLFGI AIATVILPAL
SKKHVNAEGD GFAKTMDWGI KAILLMGVPA MCGLIVLAKP MLMVLFMRGA FTLDDVDMAS
YSLMAYGSGL LSFMLIKVLA PGYYSRQDTK TPVRYGIVAM VSNMVFNLIF VFPFGYVGLA
IATSLSALLN ASLLYRGLHR AGVYQIPRQT FVFMGKTLVA AALMIAVLYL LLPSIDTWLA
LSFMGRATQL AYLIGAGAVV YLLAMLLLGI RPWRMKAGF
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