| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1081 |
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| Symbol | |
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| ID | 4924069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1245127 |
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| End bp | 1246410 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162614 |
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| Product | threonine synthase |
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| Protein accession | YP_001093211 |
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| Protein GI | 127512014 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0498] Threonine synthase |
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| TIGRFAM ID | [TIGR00260] threonine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.301795 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTCT ATAACTTAAA GCACCCCTCA CAGAAGGTTA GTTTCACTCA GGCGGTTAAG
CTGGGCCTGG GGAAAGATCG TGGCTTGTTT TTCCCTGTCT CTATCCCCAA GTTAGATAAT
GTCGATGCGC TGCTGGCGAT GGACTTTGTC GAGCGTTCTA AGGCGGTTTT GGGGGCCTGG
TTGGCAGACG AACTGGGTCA GGAGATGGTG GATGGCCTGG TGGAGCGCGC CTTTAATTTT
GAGCTGCCGC TGACCAAGGC CGATGACAGA CGTTTCTGCC TGGAGCTATT CCATGGCCCG
ACCCTGGCAT TTAAAGACTT CGGCGCCCGC TTCATGGCCC AGTGCCTCAA TAGCCTGGCC
CAGGAAGATA AACTCACCAT ATTGACCGCC ACCTCGGGTG ATACCGGCGC CGCCGTTGCC
GATGCCTTCT ACGGGCTGGA TAAGGTGCAG GTGGTAGTGC TCTATCCAAA GGGCAAGATC
AGCCTGCTAC AGGAGAAGAT GTTTACCACC TTGGGCGATA ATATTCATAC CGTGGCGGTG
GAGAGTGATT TCGATGCCTG TCAGGATATG GTTAAGGCCG CCTTCGAAGA CAGCGATGTG
CGTGACGGCC TGCATCTTAA CTCGGCAAAC TCTATCAACA TCAGCCGCTT GCTGGCGCAG
ATCTGCTACT ACTTCGAGGC GGTAGCCCAG TTTAAACAGA CCAATCAAGG CGATCCTGTG
ATCGCCGTGC CCAGCGGTAA TTTCGGCAAC CTGACGGCTG GCCTATTTGC CAAGGCGATG
GGACTGCCGG TGAAGCGTTT CGTGGCGGCC ACCAACAGTA ACGATACTGT GCCGCGCTAT
CTGGCCGATG GTCAGTGGTC GCCTAAGGCA ACCGTCGCGA CCCTCTCTAA TGCCATGGAC
GTGGCCGAGC CGAGCAACTG GCCCAGGGTT GAGACCATCA TGGAGGTGAT GAACTGGCCA
CTGAGCGAAC TGGTGGGCGT TGGTCTCTCC GAGCAAGATA CCGTGGAGGC GTTGGATGAG
CTCTATTGCG GCGGTTATCT ATCCGAGCCT CACGCGGCCA TCGCCGCTAA GGCGCTGTCG
TTAACCATGT CGGCCGATGA GCAGGGGATC TTCCTCGGTA CGGCCCATCC GGCCAAGTTT
AAAGAGGTGG TGGAGCAGGC GCTGGCTATC GAGCTTGAGC TGCCGCCTGA GCTACAAGCG
GTGAAGGATA AGCCTATCCT GTCGGCCGAA CTGCCTGCCG ATTTTGCCCG CCTTAAGGCT
CACCTGTTTG AGACCTTGGC TTAG
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| Protein sequence | MELYNLKHPS QKVSFTQAVK LGLGKDRGLF FPVSIPKLDN VDALLAMDFV ERSKAVLGAW
LADELGQEMV DGLVERAFNF ELPLTKADDR RFCLELFHGP TLAFKDFGAR FMAQCLNSLA
QEDKLTILTA TSGDTGAAVA DAFYGLDKVQ VVVLYPKGKI SLLQEKMFTT LGDNIHTVAV
ESDFDACQDM VKAAFEDSDV RDGLHLNSAN SINISRLLAQ ICYYFEAVAQ FKQTNQGDPV
IAVPSGNFGN LTAGLFAKAM GLPVKRFVAA TNSNDTVPRY LADGQWSPKA TVATLSNAMD
VAEPSNWPRV ETIMEVMNWP LSELVGVGLS EQDTVEALDE LYCGGYLSEP HAAIAAKALS
LTMSADEQGI FLGTAHPAKF KEVVEQALAI ELELPPELQA VKDKPILSAE LPADFARLKA
HLFETLA
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