Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1057 |
Symbol | |
ID | 4921109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1219531 |
End bp | 1220268 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640162590 |
Product | pyridoxine 5'-phosphate synthase |
Protein accession | YP_001093187 |
Protein GI | 127511990 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0854] Pyridoxal phosphate biosynthesis protein |
TIGRFAM ID | [TIGR00559] pyridoxine 5'-phosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGTA TTCATCTAGG CGTTAATATC GATCACATTG CCACCTTACG TCAGGCCCGT GGGACCAGTT ACCCGGATCC CGTCCATGCC GCAGCCGTTG CTGAGCATGC CGGCGCCGAA GGTATTACCG TGCATCTGCG TGAAGACAGA CGCCATATCT GCGACAGAGA CATCTATCTG CTGGCCAAGA CCATCAAGAC ACGCATGAAT TTCGAGATGG CGGTGACCGA CGAGATGTTG GATATCGCCT GCGAGGTGAA GCCTGCCTAT GTCTGTTTGG TACCTGAGAA GCGTGAAGAG CTGACCACAG AAGGCGGCCT GGATGTGGCG GGCCAGCAGG ATAAGATCCG CGCCGCGGTC GAGCGTTTGA CTGCCCTGGG CATCAAGGTG TCGCTGTTTA TTGATGCCGA CCCTGTGCAG ATCGATGCCA CTGTCGCCGT AGGTGCCCCG GTTATTGAGC TACACACAGG TTGCTATGCC GACGCCGAGA CAGATGCCGA ACAGGCCAAG GAGCTGGCAC GCATTACCGA GATGGCAACC TACGCCCACG GTAAGGGGCT GGTGGTCAAC GCGGGCCATG GTCTTCATTA TCACAATGTG AAGTCTATCG CGGCCATTCC TGAGCTTTAT GAGCTTAATA TCGGTCATGC CATCATCGCC CGCGCAGCTA TCGATGGCTT AGATAAGGCG GTACGTGACA TGAAGCAGCT GATGGTCGAA GGTCGCAGCG GTCAGTAA
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Protein sequence | MSRIHLGVNI DHIATLRQAR GTSYPDPVHA AAVAEHAGAE GITVHLREDR RHICDRDIYL LAKTIKTRMN FEMAVTDEML DIACEVKPAY VCLVPEKREE LTTEGGLDVA GQQDKIRAAV ERLTALGIKV SLFIDADPVQ IDATVAVGAP VIELHTGCYA DAETDAEQAK ELARITEMAT YAHGKGLVVN AGHGLHYHNV KSIAAIPELY ELNIGHAIIA RAAIDGLDKA VRDMKQLMVE GRSGQ
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