Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1055 |
Symbol | era |
ID | 4921107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1217607 |
End bp | 1218602 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640162588 |
Product | GTP-binding protein Era |
Protein accession | YP_001093185 |
Protein GI | 127511988 |
COG category | [R] General function prediction only |
COG ID | [COG1159] GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00436] GTP-binding protein Era |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.305359 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAACA AACCCGAGCA GCCTGAAGGC GCACAAGAGC CGAGTCTAGA CGAGCTGCTG GCGCGGATGA ACAGCGGCCG CAGTGGTAGC CAATATGAGG TGACCTACTG TGGCATGGTG GCCATCGTCG GCCGTCCTAA TGTAGGCAAG TCGACCCTGC TGAATAAGCT ACTGGGTCAG AAGATCTCTA TCACCTCTAA GAAGCCGCAG ACCACGCGTC ACCGCATCAT GGGCATTCAC ACCGATGGCC CGCGTCAGGT GGTGTTTATC GATACCCCTG GTCTGCATAT TGAAGAGAAG CGCGCCATCA ACCGTCTGAT GAACCGCGCG GCGTCCAGCT CTCTGGCCGA GGTTAGCCTA GTGGTATTCG TGGTCGATGG TCTTAACTGG ACCGCCGACG ATGAGATGGT GCTAAAGAAG CTTCATAACC GTGACGATGG CCGCAAGACG ATTCTGGCCA TCAACAAGGT GGATAACATC AAGGACAAAG AGGCGCTGTT CCCGCATCTG CAGACCCTGG CGGCCAAGTT TGAATTTGAT GAGATCTTGC CTATCTCGGC AACCCATGGC ACCAATGTGC AGCGCATCAT GGAGCTGGCC TTAGAGTCGG TACCTGAGTC TCCGCACTAC TTCCCCGAGG ATTATGTCAC CGACCGTTCT CAGAAGTTTA TGGCCTCTGA GATAGTGCGC GAAAAGCTGA TGCGTTTCCT CGGCGACGAG CTACCCTACG ATGCCACGGT AGAGATAGAG CAGTTTAAGA TGATGGAAAA CGGCGTCTAT CAGATCAATG CCTTGATCTT GGTGGAGCGC GAGACCCAGA AGCGTATGGT GATCGGCAAC AAGGGTGAAC GTATTCGCAC CATTGCCACC CAAGCCCGTC AAGATATGGA GGTCCTGTTC GATAACAAGG TCTTCCTTGA GGTCTGGGTT AAGGTCAAGT CTGGCTGGGC CGACGATGAA CGCGCCCTAC GCTCATTAGG CTACGGCGAG AGCTAA
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Protein sequence | MSNKPEQPEG AQEPSLDELL ARMNSGRSGS QYEVTYCGMV AIVGRPNVGK STLLNKLLGQ KISITSKKPQ TTRHRIMGIH TDGPRQVVFI DTPGLHIEEK RAINRLMNRA ASSSLAEVSL VVFVVDGLNW TADDEMVLKK LHNRDDGRKT ILAINKVDNI KDKEALFPHL QTLAAKFEFD EILPISATHG TNVQRIMELA LESVPESPHY FPEDYVTDRS QKFMASEIVR EKLMRFLGDE LPYDATVEIE QFKMMENGVY QINALILVER ETQKRMVIGN KGERIRTIAT QARQDMEVLF DNKVFLEVWV KVKSGWADDE RALRSLGYGE S
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