Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1020 |
Symbol | anmK |
ID | 4923588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 1178664 |
End bp | 1179773 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640162553 |
Product | anhydro-N-acetylmuramic acid kinase |
Protein accession | YP_001093150 |
Protein GI | 127511953 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2377] Predicted molecular chaperone distantly related to HSP70-fold metalloproteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.01577 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAC ATTACTATAT CGGCCTGATG TCGGGCACTA GCATGGATGG TGTCGACGCG GTATTGGTCG ACTTCAGCGA CGATAAGATC ACCCTGGTCG ATACCCATAC CGAGCCGCTG CCCAGCCATC TGCTGAGCGG CCTGCAGCGC CTGTGTCAGT CGGGATCGGA CGAGATCAAC CGCATGGGCA TACTGGACCG CAGCGTCGGC AAGCTGTTTG CCCAGGCGGT GGAGGGCCTG CTGACCAAGA GCGGCGTCGA CAGACATCAG ATCATGGCCA TCGGCAGCCA CGGCCAGACG GTGCGCCACA TGCCCAACCT GGAGCTGGGT TTTACCCTGC AGATTGGCGA CCCCAACACC ATAGCCGCCC TCACGGGCAT AGATGTTATC GCCGACTTTC GCCGCAAAGA TATCGCCCTG GGTGGTCAGG GCGCGCCTCT GGTACCCGCC TTTCACCAAC AGCTATTTGC GAGAACCGGG CACCAGCGGA TGATCCTCAA CATAGGCGGC ATCTCCAACA TCACCTATCT GCCTGGGGAT GCCAGCGCTG TAATTGGTTT CGATAACGGT CCGGGCAATA CCCTGATAGA CACTTGGATC AAGCAGGTTC AAGGTGAGGC TTACGATAAG GACGGCGCCT GGGCGGCCAG CGGCAAGACG GATGAGCAGC TACTCAAGCA GATGCTTTCC CACTCCTATT TCTCCCTCAG CGCCCCCAAG AGCACGGGAC GCGAGCTGTT TAACCAGGCC TGGCTGGAGC AGCAGACCTC CGATTTCGGC TATCTGCACG AGTCGGATAT TCAGTCCACC CTGCTGGATC TCACCTGCCA CAGCATAGCC AACGACTGCC TCAAGCTCAC CGAAAAGGCC GAGCTCTATG TGTGCGGTGG CGGCGCCTTT AACACTGAGT TGCTAACACG TCTGGCGGCG CTGCTGCCAG GCTATCAGGT GCATACCACC GCCAGCCTGG GGGTCGATCC TCAGTGGGTG GAAGGCATCG CCTTCGCCTG GCTCGCCATG CGCCACAAGC TGGGGCTACC GGGTAACCTG CCGGCCGTCA CGGGCGCCAG CCGGGAAACC GTGCTCGGCG GCCTCTTCCC CGGCAACTGA
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Protein sequence | MSKHYYIGLM SGTSMDGVDA VLVDFSDDKI TLVDTHTEPL PSHLLSGLQR LCQSGSDEIN RMGILDRSVG KLFAQAVEGL LTKSGVDRHQ IMAIGSHGQT VRHMPNLELG FTLQIGDPNT IAALTGIDVI ADFRRKDIAL GGQGAPLVPA FHQQLFARTG HQRMILNIGG ISNITYLPGD ASAVIGFDNG PGNTLIDTWI KQVQGEAYDK DGAWAASGKT DEQLLKQMLS HSYFSLSAPK STGRELFNQA WLEQQTSDFG YLHESDIQST LLDLTCHSIA NDCLKLTEKA ELYVCGGGAF NTELLTRLAA LLPGYQVHTT ASLGVDPQWV EGIAFAWLAM RHKLGLPGNL PAVTGASRET VLGGLFPGN
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