Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1017 |
Symbol | |
ID | 4923104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1177122 |
End bp | 1177472 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640162550 |
Product | iron-sulfur cluster insertion protein ErpA |
Protein accession | YP_001093147 |
Protein GI | 127511950 |
COG category | [S] Function unknown |
COG ID | [COG0316] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00049] Iron-sulfur cluster assembly accessory protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000125039 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGAAC AAGCTGAAGA TACAATGCCA ATTCGTTTTA CCGACGCGGC AGCGGCCAAG GTAAAAACCC TATTGGAGGA AGAGCAAAAC GACGCGCTTA AGTTACGTGT GTACGTGACA GGTGGCGGGT GTTCAGGTTT TCAGTATGGC TTTACATTCG ATGAGAAGGT CAACGAAGGT GACTTTACCG TTGAGAAACA AGGGGTTCAA TTGGTTGTCG ACCCAATGAG CCTGCAATAC CTGGTAGGCG GTGAAGTGGA TTACACCTCG GGCCTGGAAG GCTCTCGTTT CTTCGTTAAG AACCCTAACG CCACCACCAC CTGTGGCTGT GGTGCCAGCT TCTCGGTTTA G
|
Protein sequence | MTEQAEDTMP IRFTDAAAAK VKTLLEEEQN DALKLRVYVT GGGCSGFQYG FTFDEKVNEG DFTVEKQGVQ LVVDPMSLQY LVGGEVDYTS GLEGSRFFVK NPNATTTCGC GASFSV
|
| |