Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1006 |
Symbol | |
ID | 4920785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1163002 |
End bp | 1163943 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640162539 |
Product | ErfK/YbiS/YcfS/YnhG family protein |
Protein accession | YP_001093136 |
Protein GI | 127511939 |
COG category | [S] Function unknown |
COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000114472 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCGTA AATTGCTGTT GCTCATCTTG AGTCTCGCAC CACTGCAGTT ACTTGCTAAT GTCTATTCCC TGCCGGCCAA TGGCGGCCGC CTCATCGGTG AGCTGCAGAC CCATGTGGTC GAGAAGGGCG ACTACTTCAA AACCATCGCC GATAAATACA ATATCGGTAT CTTGGAGTTG ATGGAAACCA ATCCTGGGGT GGATCCTTTC CTGCCGACTC CGGGCACCCA GTTAGTGATC CCCACCCAGA TGTTGCTGCC GGATGTGCCG CGCAAGGGCA TAGTGATCAA CCTGCCGGAG CTGCGTCTCT ACTATTTCCC TAAGAATGGC CGCGAGGTGC ATGTCTTCCC CGTGGGCATT GGCCGTATCG GCCGTGAAAC CCCAGAGATG ACCACCAAGA TTAAGGCGCG TATCCCTAAT CCGAGCTGGA CACCGCCGGC GAGCCTGCGC GCCGAGCACC TGCGTGAGCG CGGCGAGGTG TTGCCGCCCG TGGTGCCTGC TGGCCCGGAT AACCCACTGG GTAAATACGC CATGCAGCTC TCCTATGGCG ATGGCAGCTA CCTGATCCAC GGCACCAACA AGGATTTCGG TATCGGCATG CGCGTCAGCG CCGGCTGTAT CAGACTCAAC CCAGATGATA TAGAGTGGTT GTTCCATCAG GCCAAATATG GCGACAGCGT GCGGGTGATC AACCAAACGG TAAAGATTGC TACCGAGCCC GATGGCCGTC AGATCATCGA GGTGCATTCG CCCCTGTCAA AGACGGAAGA TCAGCCCCGT GAGAAGGTGA TCAGCCTGAG CAGCAAGGTG GTGAAATTTA TCAGCCAGGA AAGCGTCGAC AACACCAAGG CAAACGATGC CCTGCTGACC CAGAACGGCA TCCCTATGGT GATCTCACAT CCACCGCTAA CGGCGGCTCA GGATTTAGAG ATCACTCCCT AG
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Protein sequence | MMRKLLLLIL SLAPLQLLAN VYSLPANGGR LIGELQTHVV EKGDYFKTIA DKYNIGILEL METNPGVDPF LPTPGTQLVI PTQMLLPDVP RKGIVINLPE LRLYYFPKNG REVHVFPVGI GRIGRETPEM TTKIKARIPN PSWTPPASLR AEHLRERGEV LPPVVPAGPD NPLGKYAMQL SYGDGSYLIH GTNKDFGIGM RVSAGCIRLN PDDIEWLFHQ AKYGDSVRVI NQTVKIATEP DGRQIIEVHS PLSKTEDQPR EKVISLSSKV VKFISQESVD NTKANDALLT QNGIPMVISH PPLTAAQDLE ITP
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