| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0977 |
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| Symbol | |
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| ID | 4920657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1121866 |
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| End bp | 1123152 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162509 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001093107 |
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| Protein GI | 127511910 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTGTA CACCTCATGC AAATTCCTAT TATGCGGCAT CTGCCAATAC CAAGGCGCTG
CGCGACAAGT TAAGCGATAA CATAGAGACC GACGTCTGTA TCATAGGCGC CGGCTATACC
GGCCTCTCTT CGGCGATCCA TCTGCTGGAG GCGGGCTTTA AGGTGACTGT ACTGGAAGCC
GCCAGGGTTG GCTTCGGCGC CTCAGGGCGT AACGGCGGTC AGATAGTCAA CAGCTTCAGC
CGGGATATCG ACACCATAGA AAAGGTTGTG GGCACAGAGC AGGCCAAGTT GTTTGGTCAG
ATGGCCTTCG AAGGTGGCCG CATCCTCAAG GGGCTGGTAG CTAAATACAA CATCCAGTGC
GATCTGAAAG ATGGCGGCGT GTTTGCAGCG CTGAACAAGA AACAGATGGG CCACCTCGAG
GCGCAAAAAG CGCTGTGGGA GAAGCATGGT CATCTGGGGC ACTTAGAGCT GCTGGATGAG
CAGGGCATTC GCGACGTGGT GGATACCGAG CGTTATGTCG GTGGATTGCT TGATAAGAGC
GGCGGCCATA TTCATCCGCT TAACCTGGCA CTGGGTGAGG CCGATGCGGT GGAATCCTTG
GGCGGACAGA TCTTCGAAGA TTCGGCCGTT GTTCGTGTCG ATCAGGGCGA GAATCCTGTG
GTGCATACTC AGGAAGGTTC GGTGAAGTGT AAGTTTGTCA TCGTCGCCGG TAACGCTTAC
CTCAAGGGGC TGCTGCCCGA GCTGCAGGCC AAGTCTATGC CCTGTGGTAC TCAGGTGATC
ACCACTGAGC CCTTGGGTGA GGAGCTGGCG CACTCGCTGC TGCCCCAGGA CTACTGCGTG
GAAGATTGTA ACTATCTGCT GGATTACTTC AGGCTCTCGG GTGACAAGCG CCTCATCTAT
GGTGGCGGTG TGGTCTACGG CGCGCGGGAT CCTGCCAACA TAGAGGCGAT CATCCGTCCC
AAGATGCTGG CGACCTTCCC GCAGCTTAAG GATGTGAAGA TAGACTTTAC CTGGACGGGT
AACTTCCTGC TGACCCTGTC GCGCCTGCCG CAGGTGGGGC GTATCGGCGG TAACATCTAT
TACTCTCAGG GTTGTAGCGG CCATGGGGTG ACCTATACCC ATCTGGCGGG GCAGATACTG
GCCGAGACCA TCAATGGCCA GGCGAAACGT TTCGATGCCT TCGCCCAGTT GCCCCATTAC
CCCTTCCCGG GCGGTCATCT GCTGCAGGTG CCTTTCTCGG CGATCGGCGC CTGGTACTAC
ACAATGCGTG ACAAGCTGGG TGTCTAG
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| Protein sequence | MTCTPHANSY YAASANTKAL RDKLSDNIET DVCIIGAGYT GLSSAIHLLE AGFKVTVLEA
ARVGFGASGR NGGQIVNSFS RDIDTIEKVV GTEQAKLFGQ MAFEGGRILK GLVAKYNIQC
DLKDGGVFAA LNKKQMGHLE AQKALWEKHG HLGHLELLDE QGIRDVVDTE RYVGGLLDKS
GGHIHPLNLA LGEADAVESL GGQIFEDSAV VRVDQGENPV VHTQEGSVKC KFVIVAGNAY
LKGLLPELQA KSMPCGTQVI TTEPLGEELA HSLLPQDYCV EDCNYLLDYF RLSGDKRLIY
GGGVVYGARD PANIEAIIRP KMLATFPQLK DVKIDFTWTG NFLLTLSRLP QVGRIGGNIY
YSQGCSGHGV TYTHLAGQIL AETINGQAKR FDAFAQLPHY PFPGGHLLQV PFSAIGAWYY
TMRDKLGV
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