| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0966 |
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| Symbol | |
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| ID | 4921462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1108595 |
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| End bp | 1109935 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640162498 |
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| Product | beta alanine--pyruvate transaminase |
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| Protein accession | YP_001093096 |
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| Protein GI | 127511899 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0569565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGATT TTAATAAAGC TGACCAGGTA GCAACAGGCA CGCTGGAACA CTATTGGATG
CCTTTTACCG CCAATAGACA GTTTAAACAA AGTCCCCGCC TCCTCGCACA GGCAGAGGGG
ATGTACTACA AGGATGTAAA CGGCCGTCCC GTACTCGACG GCACAGCCGG TCTCTGGTGC
TGTAATGCCG GACACGGTCG CAAGGCGATC TCCGAGGCGG TCAGCAAACA GATCCACGAG
ATGGACTATG CACCCTCATT CCAGATGGGC CACCCACTGG CCTTCGAACT GGCCGAGCGT
CTCGCCGCCA TCGCCCCCAA AGGGATCAAC AAGGTATTTT TCACCAACTC TGGCTCTGAA
TCTGTCGACA CGGCGCTGAA GATCGCCCTC AACTACCACA GGGCCCGTGG TGAGGCGACC
CGTACCCGTT TCATCGGTCG TGAGCTGGGA TACCATGGCG TCGGCTTCGG CGGCATCTCA
GTTGGTGGCA TAGGCGGCAA CCGCCGCACC TTCAGCCAGC AGCTACTGCA GGGGGTCGAC
CACCTGCCCC ACACCCTGGA TATCCAGCAA AACGCCTTCT GTAAGGGACT ACCGGAAACC
GGCGCAGAGA AGGCCGAGGT GTTGGAGCAG CTCGTTACCC TACATGGCGC CGAGAATATC
GCCGCGGTGA TCGTCGAGCC TATGTCGGGT TCGGCCGGGG TCATACTCCC GCCTCAGGGC
TACCTTAAGC GTCTGAGAGA GATCACCCGC AAGTACGGCA TCCTATTGAT CTTCGATGAG
GTGATCACCG GCTTTGGCCG TGTGGGCGAC GCCTTCGCCA GCCAGCGCTG GGGCGTCACA
CCGGATATGA TCACCACAGC CAAGGCGCTC AACAACGGCA CCATCCCCAT GGGCGCCGTG
CTGATCGACG ATGCCATCTA TGATGCCAGC ATGGATGCCC CAGAGGGCGC CATAGAGCTC
TACCATGGCT ACACCTATTC AGGCCATCCG GTAGCTGCGG CCGCCGCCAT CGCTACCTTA
GATATCTATC AGGAGGAGCA GTTGTTCGAG CGCACCAAGT CTCTGGAAGG CTACTTCGAA
AAAGCGGTGC ACAGCCTCAA GGGACTACCG AACCTTATCG ACATTCGTAA CACAGGCCTG
GTAGCCGGTA TCCAGTTTAG TCCGAGCGAT AAAGGCATAG GTAAGCGCGG CTTCGGCATC
TTCGAGACCT GTTTCAAGAA CGGCACCCTG GTCAGGGCAA CGGCCGACAC CATCGCCCTA
TCGCCGCCAC TGATCGTCGA CGAGGCCCAG ATTGACCAAA TGGTCAACAC CCTAAGCGAT
GCCATCACCA CAGTTGGCTA A
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| Protein sequence | MEDFNKADQV ATGTLEHYWM PFTANRQFKQ SPRLLAQAEG MYYKDVNGRP VLDGTAGLWC
CNAGHGRKAI SEAVSKQIHE MDYAPSFQMG HPLAFELAER LAAIAPKGIN KVFFTNSGSE
SVDTALKIAL NYHRARGEAT RTRFIGRELG YHGVGFGGIS VGGIGGNRRT FSQQLLQGVD
HLPHTLDIQQ NAFCKGLPET GAEKAEVLEQ LVTLHGAENI AAVIVEPMSG SAGVILPPQG
YLKRLREITR KYGILLIFDE VITGFGRVGD AFASQRWGVT PDMITTAKAL NNGTIPMGAV
LIDDAIYDAS MDAPEGAIEL YHGYTYSGHP VAAAAAIATL DIYQEEQLFE RTKSLEGYFE
KAVHSLKGLP NLIDIRNTGL VAGIQFSPSD KGIGKRGFGI FETCFKNGTL VRATADTIAL
SPPLIVDEAQ IDQMVNTLSD AITTVG
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