| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0965 |
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| Symbol | |
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| ID | 4921439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1107054 |
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| End bp | 1108544 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640162497 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_001093095 |
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| Protein GI | 127511898 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0738299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGA TAAACCACTA CATCAACGGC CAGCACACAC AGCCCAGCGC CCGCAGCGCC
GCCGTCTTCG AACCCGCCAC CGGCGAGCAC AAGGCCAACG TCTCCCTGGC CAGCGCGCTC
GAGGTGGATG CGGCCATCGA ACTGGCCAAG AAGGCCCACG GCCCCTGGTC AGAGATGACC
CCCCTTAACC GCGCGCGCAT TCTGTTTAAG TTTAAGGCAC TGGTCGAAGC CAACATGGAT
GAGCTGGCGG CCATGATCAC CCGCGAACAC GGCAAGGTGC TCGACGATGC CAAGGGCGAG
ATCATCCGTG GCCTCGAGGT GGTGGAGTTT GCCTGTGGCA TCCCTCATCT ACTCAAGGGC
GAGCACACAG AGCAGGTCGG TGGTGGCGTC GATGCCTGGA CACTCAACCA ATCCCTGGGC
GTAGTGGCCG GCATCGCCCC CTTTAACTTC CCTGTGATGG TGCCTATGTG GATGTTCCCC
ATCGCCATCG CCGCGGGCAA TACCTTTATC ATGAAACCGT CGGAGAAGGA TCCGACCTCC
GTGATGCGCA TGGCCGAACT GCTCACCGAG GCAGGCCTGC CGGATGGCGT GTTTAACGTG
GTCAACGGCG ACAAGGAAGC GGTGGACACC CTGCTGACCC ACAAGGACAT TCAGGCGGTG
AGCTTCGTTG GCTCCACGCC AATTGCCGAG TATATCTATC AGACGGCGGC GGCTCACGGC
AAACGTGTAC AGGCCTTGGG CGGCGCGAAG AACCACATGC TGTTGATGCC AGATGCGGAC
CTCGACCAGG CGGTCAGCGC CCTGATGGGC GCCGCCTATG GCAGTGCCGG CGAGCGTTGC
ATGGCGATCT CTGTCGTGCT GGCCGTCGGC GAAGTGGGTG ATGCCTTGGT AGAGAAACTG
CTGCCACAGA TCCAGGCGCT CAAGGTCGGT AACGGCCTGG AAGGCGAGAT GGAGATGGGA
CCGCTGATCT CGGCGCAGCA TCTCGACAAG GTACGTAGCT ATGTGGACAC AGGCGTGAGC
GAGGGTGCAA GCCTGCTGGC CGATGGCCGT CAACTCACGG TCGCCGATCA CGAGCAGGGC
TACTTCCTCG GCGGCTGCCT ATTCGACCAC GTCACCCCAG AGATGACCAT CTACAAGGAA
GAGATCTTCG GCCCAGTGCT GACCATCGTC CGGGTGAAGG ATTATGCCGA GGCGCTGACC
CTGATCAACG AACACGAGTT TGGTAACGGC ACCGCCATCT TTACCCAGAG CGGCGAGGCG
GCGAGACACT TCTGCCACCA TGTGCAGGTC GGCATGGTTG GGGTCAATGT ACCTATCCCA
GTCCCTATGG CCTTCCATAG TTTTGGCGGC TGGAAACGCT CCCTCTTCGG CCCACTGCAC
ATGCATGGCC CGGACGGCGT ACGCTTCTAT ACCAAGCGTA AGGCGATCAC CGCCCGCTGG
CCCAAGGGCA AGGGGAGTCA GGCAGAATTT GTCATGCCGA CCATGAAATA A
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| Protein sequence | MQQINHYING QHTQPSARSA AVFEPATGEH KANVSLASAL EVDAAIELAK KAHGPWSEMT
PLNRARILFK FKALVEANMD ELAAMITREH GKVLDDAKGE IIRGLEVVEF ACGIPHLLKG
EHTEQVGGGV DAWTLNQSLG VVAGIAPFNF PVMVPMWMFP IAIAAGNTFI MKPSEKDPTS
VMRMAELLTE AGLPDGVFNV VNGDKEAVDT LLTHKDIQAV SFVGSTPIAE YIYQTAAAHG
KRVQALGGAK NHMLLMPDAD LDQAVSALMG AAYGSAGERC MAISVVLAVG EVGDALVEKL
LPQIQALKVG NGLEGEMEMG PLISAQHLDK VRSYVDTGVS EGASLLADGR QLTVADHEQG
YFLGGCLFDH VTPEMTIYKE EIFGPVLTIV RVKDYAEALT LINEHEFGNG TAIFTQSGEA
ARHFCHHVQV GMVGVNVPIP VPMAFHSFGG WKRSLFGPLH MHGPDGVRFY TKRKAITARW
PKGKGSQAEF VMPTMK
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