Gene Shew_0959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0959 
Symbol 
ID4923711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1103138 
End bp1103614 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content58% 
IMG OID640162491 
Producthypothetical protein 
Protein accessionYP_001093089 
Protein GI127511892 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.893116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACA AACCGACACG GGTGATGGCC CTCTACCACC GCCTAACCAA GTGGCCACTG 
GGCCATAAGT TTTTCTCCCT CATGGTGTCA CGCATGGCGC CTTACTTCGC CACCGTTAAG
CCCCTGGTCA CAGAGCTGAG ACCCAACTAT TGCCAGTTGC TGGTGCGAAA GCGCAAGGCG
GTGCAGAACC ACATAGGCAC AGTGCACGTC ATCGCCATCT GTAATGGCCT GGAGATGGCC
ATGGGCACCA TGGCCGAGGC GTCAATTCCT GCCCACCTGC GCTGGATCCC CAAGGGAATG
AGTGTCGACT ATACCGCCAA GGCCGGCAGC GACATCCGCT GCATCGCCGA GGTCACGCCC
GAACAGTGGG TCGAGGGCGA CATGCTGGTC AATGTTACCG CCCTGGATGA GAACGATGTG
GTGGTGGTCA AGGGCCACAT CAAGCTGTGG ATCTCCCTCA AACCCTCAAA AGCCTAG
 
Protein sequence
MNNKPTRVMA LYHRLTKWPL GHKFFSLMVS RMAPYFATVK PLVTELRPNY CQLLVRKRKA 
VQNHIGTVHV IAICNGLEMA MGTMAEASIP AHLRWIPKGM SVDYTAKAGS DIRCIAEVTP
EQWVEGDMLV NVTALDENDV VVVKGHIKLW ISLKPSKA