Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0932 |
Symbol | |
ID | 4920638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1065921 |
End bp | 1067009 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640162464 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001093062 |
Protein GI | 127511865 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAACTG CACCACCGGC ATACTTTCCG ACCCAATATT GGCATGCCCT GGATGACGGG CGGGTGTGCT GCGACGTCTG CCCGCGCAAG TGCACATTGC GCGAGGGTAA ACGCGGCGCC TGCTTCGTGC GCATGCACCA TCAAGGCGAG ATAGTGCTGA CCAGCTATGG TCGCTCCTCG GGTTTCTGTA TCGACCCTAT CGAGAAGAAG CCGCTAAACC ATTTCTACCC CGGCTCAAGC GTGCTGAGTT TCGGCACCGC CGGGTGCAAC CTGAGCTGTC TCTTCTGTCA AAACTGGGAC ATGAGTAAGT CGCGCCAGAT GGATACCCTG TGTGACAGCG CCATGCCAGA CGAGCTGGCG GCCACCGCCC GTCGCCATGG CTGCAAGAGC ATCGCCTTTA CCTATAACGA TCCTGTGGTG TTTATGGAAT ACGCCATCGA TGCCGCCCAG GCGGCCCATG AACTTGGGCT AAAGAGCGTG GCGGTGAGCG CGGGCTATAT CTGTGAGGCG CCGAGGATTG AGTTTTATCG GTATATGGAC GCGGCCAATA TCGACCTTAA GGCCTTTAGC GAGTCGTTTT ATCACAAGAT CTGTCACGGC CAGCTGCAAC CTGTGCTCGA GACCTTGCTC TATCTCAAGC ATGAGACCCA GGTATGGTTT GAGATAACTA CATTGTTGAT CCCCGGCGAG AACGACAGCG ATGAGGAGCT CAATGCCATG TGTCAGTGGC TGGTGGAAAA CCTGGGGCCA GATGTGCCGC TACATTTCAG CGCCTTTCAC CCCGACTTTA AGCTGCTGGA CAGGCCGCCG ACACCGCTAA GCACGCTGCA ACGGGCGCGG CGTATCGCCC TCAATCACGG CCTGCATTAT GTCTATTGCG GCAATGTGCA TGACCCAGAT TCCGACGCCA CTTACTGCGC CAGCTGTCAC AAACGCCTGA TCGAGCGTGA CTGGTATCAG CTCGGGCAAT ATGCGCTGGA TGAGCAGGGT ACCTGCCGAT ACTGCGGCGC GCCGCTGCCG GGACGCTTTG CCAGGGTGCG GGAGGATTTC GGTGCACGGC GGATCGCGGT GCGGATCCAT CGCGACTGA
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Protein sequence | MLTAPPAYFP TQYWHALDDG RVCCDVCPRK CTLREGKRGA CFVRMHHQGE IVLTSYGRSS GFCIDPIEKK PLNHFYPGSS VLSFGTAGCN LSCLFCQNWD MSKSRQMDTL CDSAMPDELA ATARRHGCKS IAFTYNDPVV FMEYAIDAAQ AAHELGLKSV AVSAGYICEA PRIEFYRYMD AANIDLKAFS ESFYHKICHG QLQPVLETLL YLKHETQVWF EITTLLIPGE NDSDEELNAM CQWLVENLGP DVPLHFSAFH PDFKLLDRPP TPLSTLQRAR RIALNHGLHY VYCGNVHDPD SDATYCASCH KRLIERDWYQ LGQYALDEQG TCRYCGAPLP GRFARVREDF GARRIAVRIH RD
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