Gene Shew_0897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0897 
Symbol 
ID4923878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1017610 
End bp1018011 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content49% 
IMG OID640162429 
Producthypothetical protein 
Protein accessionYP_001093027 
Protein GI127511830 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0111601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.417141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTCA AGCTGATACA GGCAACTCTT GTCATCATTT TACTGTGTAA CATTACCTAT 
GCCGCGGGCC AAGAGTCTAC GGCCAGCTTG TCGTTGTCAC CCCAATTTTG CATCACGGCC
GATGTCGAGC AGAGCTGTGA AATCGAGTTG GTACTAAACT GGGAGACCCC CTATCCCCAG
GTAGTTTGCA TCATGTCGGA TCATAACGAG CTGGAGAAGT GGTGCGCCGA CTCGCCCAAT
ACCCATTCAC TCACCCTGAA GGTTGAGACA CAAAAAGATA TTCAATTTGT CATGATAGAC
AAAGAAAGCC ACCAAACCTT GGCCGGCGTA AAATTAAAAG TTACCCCTAC TTCGGCGCCT
CAGGTGAGAC GTCGTTATCG CAACCCCTGG AGTCTATTCT AA
 
Protein sequence
MTFKLIQATL VIILLCNITY AAGQESTASL SLSPQFCITA DVEQSCEIEL VLNWETPYPQ 
VVCIMSDHNE LEKWCADSPN THSLTLKVET QKDIQFVMID KESHQTLAGV KLKVTPTSAP
QVRRRYRNPW SLF