Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0893 |
Symbol | |
ID | 4920698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 1014521 |
End bp | 1015060 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640162425 |
Product | hypothetical protein |
Protein accession | YP_001093023 |
Protein GI | 127511826 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000267629 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.854423 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTCAC TACGCCTGCC CATCCTCACA ATCGCCGCCT TGCTACTGGG CGCCTGTGCC AGCAAACCCA CCACAGATTA CGATACCCAA TTTGATTTTA ATTCGCTCAA GCGTTTCACC CTGCAGAGAC CGGCCAATAT CGGCGACCCA CTCAGCACTG AGCGAATCGA TAGTGCCATC GTCGACAGCC TGACACAGCG CGGCTATAGC CAGGTCGCCG AACAGTCTCA GTTTATGGTG ACCTATGGCT TTAAGGTGGT GGACAAGCCA AAGAGCTCAG GCCTCTCAAT CGGCTTAGGC ACAGGCAGCT GGGGCAGCTC TGGCGGCGTA GGTGTAGGCA CCAGCGTCGG CGTGCCTTTG GGTAGCGACA GCGCCAAGAT GCAGATCATC CAGATAGATA TCGTCGACAG CGCCAGCAAC AAGCTTATTT GGCGCGGCAG CGACAAGTTT GATTACGATG ACGGCGGCGA GAAGAAGGCC AAAGAGACCC GGGAAACCGT GAACAAGATT CTCTCTCAGT TTCCCCCTAA GGCCCAATAA
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Protein sequence | MNSLRLPILT IAALLLGACA SKPTTDYDTQ FDFNSLKRFT LQRPANIGDP LSTERIDSAI VDSLTQRGYS QVAEQSQFMV TYGFKVVDKP KSSGLSIGLG TGSWGSSGGV GVGTSVGVPL GSDSAKMQII QIDIVDSASN KLIWRGSDKF DYDDGGEKKA KETRETVNKI LSQFPPKAQ
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