Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0864 |
Symbol | |
ID | 4920653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 985762 |
End bp | 986706 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640162397 |
Product | Dyp-type peroxidase family protein |
Protein accession | YP_001092995 |
Protein GI | 127511798 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2837] Predicted iron-dependent peroxidase |
TIGRFAM ID | [TIGR01413] Dyp-type peroxidase family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.746492 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAGTC TGGTTATGCC ACGTGAACAG CTGGGTGTGT GTGCCGAAGG AAATTTACAT AGCGTGTATC TGATGTTCAA CGCCAACGAC GGCGTCGAGT CTCAGCTGCG TCCCTGCGTC GCCAATGTCG CACAGTATAT CTATGAATTG GCCGACCAGT ATGCCGACAG CGCCTTCAAC GGTTTCGTGG CCATAGGTGC CAACTACTGG GATAGCCTGT ATCCAGGGCG TCGTCCTTCA CAGCTCAAGC CTTTCCCGGC CATGCATGCC GATAATCGTG ATGCACCAGC CCATGAGTAT GATCTTTTCG TGCATCTGCG CTGCGATCGT TATGACATCT TGCATCTGGT GGCCAACGAA GTGTGCCAGA TGTTTGAAGA TTTGGTTGAG CTGGTGGATG AGGAGCGCGG ATTCCAGTTT ATGGATACCC GGGATCTAAC CGGATTTGTC GATGGCACAG AGAACCCTAA GGGACGTCAT CGTCAGGATG TGGCCTTGGT GGGCGACGAA GACGAGTATT TCCGTGGCGG CAGTTATATT CATGTGCAGA AGTTTGCCCA TAACCTCAGT AAGTGGAACC GTCTGCCGCA GAAGAAGCAG GAAGATATCA TAGGCCGCAC CAAGATAGAC AATATCGAGT ATGCCTCTGA GGACAAGCCG CTTACCAGCC ACATCAAGCG GGTCAATCTG AAGGATGCCG ACGGTAAGTC GATGGAGATC CTGCGTCAGA GTATGCCTTA CGGGTCGATG AAGGAGCAGG GGCTGATGTT TATCTCAGTC TGTCGCAACT CGGTACATTT CGAGAAGATG TTGAGCAGTA TGGTTCATGG CGACGGCGAG GGGAATCACG ATCACCTGAT GCACTTTACC CAGGCACTGA CAGGCTCGGC ATTCTTTGCC CCGTCGCTTG ATTTCATGGA GCGAGAGGCA GAATTTGAGG ATTAA
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Protein sequence | MDSLVMPREQ LGVCAEGNLH SVYLMFNAND GVESQLRPCV ANVAQYIYEL ADQYADSAFN GFVAIGANYW DSLYPGRRPS QLKPFPAMHA DNRDAPAHEY DLFVHLRCDR YDILHLVANE VCQMFEDLVE LVDEERGFQF MDTRDLTGFV DGTENPKGRH RQDVALVGDE DEYFRGGSYI HVQKFAHNLS KWNRLPQKKQ EDIIGRTKID NIEYASEDKP LTSHIKRVNL KDADGKSMEI LRQSMPYGSM KEQGLMFISV CRNSVHFEKM LSSMVHGDGE GNHDHLMHFT QALTGSAFFA PSLDFMEREA EFED
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