| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0808 |
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| Symbol | |
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| ID | 4924278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 925401 |
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| End bp | 927065 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640162341 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001092939 |
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| Protein GI | 127511742 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG4564] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCAAT TAAGAATGAA AAATAAGCTG TTGGTATTTG CTCTCCTGCC CCTGATTTTG
AGTTTTCTCT TCTTAGTTTC AATCACCTAT AACCTGGAAT CTAACTCCCT CGAAGAGAAT
ATGTCGACCT TCAAGGCGAG CCTCTATAGC GAACGTAAGG CGCAGCTAAA GGATCAGGTC
GATATCGCCC TGGATATCGT CGAGCATCAG CTCTCCCTGG GGACGGCGGG CGATGTGAAC
AAGGCGCTGC GTAACGTGCG CTTCGGCACC GCCGGTTACT TCTTCATCTA TGATTTTGAC
GGCTTCAACC GCTTTCATGC GGTCAAGCCT GCGCTGGAGG GTACGGCGCA GATCGGCATG
ACAGACCCTA ACGGCAAGAA GATAGTGGTC GGCCTGATCG ATGCCGCCAG AAGCGGCGAT
GGTTTCTTCA ACTATGACTA CTCCAAACCT GGGGTCACGG GGCTGGTGCC TAAGATAGGC
TACGCCGCAA CCGTGCCGGG TAAAGATTGG ATCTTGGGTA CTGGCGCCTA CACCGACGAT
ATCGACGCCC AGGTGGAGAG CTATCGTGAG GTGATGACCA AGCACATGAA CGACAAGGCG
ATGATGATTC TGCTCTTTGC CCTGGTGCTG GTGGCGATCA CCGCCGTGGT GATGCTGGTG
GCCGCCCAGC GCATGGTCAA CCCGATTCAC AACATGGTGC AGAACCTCGA AGATATCGCC
AAGGGTGAGG GGGATCTGAC CAAGCGCCTG GACGTGCAGG GCAGCGATGA GATCGCCATG
CTGGGCCGCG CCTTCAACCA GTTTGTCGAT AAGCTGCAGG GGATCATCAA GGATGTGGCC
AGGGCCACCG TCGAGGTGAA GAGTGGCGCG GATAACATCT CCTCCCAGAC AGCGGCCATG
GCGCAGCAGC TGATCAGCCA CAACAACGAG ACGGATCAGG TGGTTACGGC GATCACCGAG
ATGTCGGCGA CCGCTTCAGA GGTGGCCATG AGCACCACTC AGGTGGCCGA GGCGACCCAG
GCGGCCACCC AGGATGTGGG CAACGCCCAG GAGTGTGTCG ACAGCTCGCT GCATGAGGTC
TCGACCCTGA TGGCGGAGAT CGATATGGCG GCCGGACATA TCAACTCCCT CAACGAGCAG
TCACAGAAGA TCAACAGCGT GCTGAGTGTG ATAGGTGGCA TCGCCGAGCA GACTAACCTG
CTCGCCCTCA ACGCCGCCAT CGAGGCGGCC CGCGCCGGTG AGCAGGGGCG CGGCTTCGCC
GTGGTAGCCG ATGAGGTGCG CAGCCTCGCG AGCCGGACAC AGGCCAGTAC CTTAGAGATC
AACGAGATGT TGTCTGAGCT GCATAATCTG GTGTCGCTGG CGGTGAGCAG CATGGAGTCG
AGTCAGCAGA GCTGTCATCG CTCGGTGACC TCGTCGCGGG CGATCTCAGA TAGCCTGGGG
GCGGTGACCT CGGCGGTGAC ATCGATCAAC GACATGAGTA CCCAGATCGC CACGGCGGCC
ACCGAGCAGA GTTCGGTGAC CGAGGAGATC AACCGCAACG TGTTTGCGAT TCAGGAGATC
GTCAACGAGC TGCTACAGGC CAGTAATAGC GCCTCGGACA CCAGTCAGGG ACTGGCCAAC
GAGGGCCGTA ACCTGGATAC CCTAGTTGGT CAGTTTAAGG TGTAA
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| Protein sequence | MWQLRMKNKL LVFALLPLIL SFLFLVSITY NLESNSLEEN MSTFKASLYS ERKAQLKDQV
DIALDIVEHQ LSLGTAGDVN KALRNVRFGT AGYFFIYDFD GFNRFHAVKP ALEGTAQIGM
TDPNGKKIVV GLIDAARSGD GFFNYDYSKP GVTGLVPKIG YAATVPGKDW ILGTGAYTDD
IDAQVESYRE VMTKHMNDKA MMILLFALVL VAITAVVMLV AAQRMVNPIH NMVQNLEDIA
KGEGDLTKRL DVQGSDEIAM LGRAFNQFVD KLQGIIKDVA RATVEVKSGA DNISSQTAAM
AQQLISHNNE TDQVVTAITE MSATASEVAM STTQVAEATQ AATQDVGNAQ ECVDSSLHEV
STLMAEIDMA AGHINSLNEQ SQKINSVLSV IGGIAEQTNL LALNAAIEAA RAGEQGRGFA
VVADEVRSLA SRTQASTLEI NEMLSELHNL VSLAVSSMES SQQSCHRSVT SSRAISDSLG
AVTSAVTSIN DMSTQIATAA TEQSSVTEEI NRNVFAIQEI VNELLQASNS ASDTSQGLAN
EGRNLDTLVG QFKV
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