| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0774 |
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| Symbol | |
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| ID | 4920817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 884145 |
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| End bp | 886397 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162307 |
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| Product | peptidase S9B dipeptidylpeptidase IV subunit |
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| Protein accession | YP_001092905 |
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| Protein GI | 127511708 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00925268 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00131566 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTAAAA AATGGATAAG TTCAGCCTTG ATGGCGGTGC CTATGTTTTT ATCTCACGCG
GTAAGTGCGT CACAACCCCA ACTAGCGCAG CCTGTCGGCG GCAATGAACC CCTCACCATA
GAAAGGCTCT ATGCCTCTCC CGCATTGGCG GGCAGCAGCC CCAGGGGCTT AAAGCTGTCG
CCCGACGGTA AGCGTGTGAC CTATCTGGCT GGTCGGGCAG AGGATCAACA CTTCTACGAT
CTCTGGCAGA TGGAGGTGGC CACCGGTAAA CAGAGCCTGC TGCTGGACGC CGACAAGTTG
AAGAGCGGCG AGCTGTCCGA TGAGGAGAAG GCGCGGCGCG AGCGTCAACG CATCTATGGT
CAGGGGATCA TGGAATATTT CTGGGCGGAT GACAGCCAGG CACTACTGAT CCCAGCATCG
GGCGTCCTCT ATTACTACTC GCTGAGCGAT AACAAGGTGA CGCCACTGCC TGTAGGGGAG
GGTTTTACCA CAGACGCCAA GCTGTCGCCT AAAGGCCATT ATGTCTCTTT CGTGCGGGAT
CAGAACCTCT ATGTGTTCGA TCTGCGCACT CAGAAGCTGA CTGCCATGAC CACAGACGGT
GGCGGCGCTA TTAAGAACGG CATGGCAGAG TTTGTCGCCC AGGAGGAGAT GGACAGGATG
ACCGGCTATT GGTGGGCGCC GGATGAGTCG GCCATCGCCT TTACCCGCAT CGACGAGTCG
GGTGTCGAGC TGGTGACTCG CAACGAGATC TATGCCGATG GCATCAAGCT GACCGAGCAG
CGCTACCCCT ATGCCGGCAA GAACAACGTC GCCATCGCCC TGGGTGTGGT GACTCTGGCT
AATAAGCAGG TACGCTGGGT CGATCTGGGA GAGGATAAGG ATATCTATCT GCCGAGGGTG
AAGTGGTTGC CCGACAGCCT GCAGCTGTCG TTTCAATGGC AGAGCCGAGA TCAGCACAGA
CTGGATCTGC GTATCTTAGA TCTTCGCAGT CAAGATGCGC CCATGACCAT GATCCGCGAG
GAGAGTGACG CCTGGGTGAA CCTGAATAAT GACCTATATT TCCTCAAGAA GTCGCCACAG
ATGCTGTGGG CGTCTGAGCG TGACGGCTTT AATCACCTCT ATTTGTTCGA CCAGCAAGGG
CGACAGCTCA GGCAGCTGAC CAAAGGTGAC TGGGCGGTGG ATGAGCTGGT GCATGTGGAT
GAGCAGGAAG GCTGGGTCTA TTTTACCGGC CGCAAGGCGA GTGTGGTCGA GCAGCACCTG
TTTCGCGTAC CGCTTAAGGG CGGCAAGATA GAGCAGCTGA GCAAGCGTAG CGGCATGCAC
GCGCCGGTAT TTGCCGACAA TCAGGCGATC TACCTGGATT ACTTCAACAG CCTGGCGCAG
CCGCCGCAGA TAAGCCTTCA TGACGAGCAG GGCAAACGCC TGGCCTGGGT CGAGCAGAAC
CAGGTGGACA AGAGCCATCC CCTCTATCCC TATTTTGGTC AGTGGCAATT GCCCGAGTTT
GGCCAGATAA AGGCGGAAGA TGGTCAGGCG CTGCAATATC GCCTGTTTAA GCCGACGCAG
TTTGACGCCA CTAAGCGGTA CCCTGTGGTG GTGCGTGTCT ACGGTGGTCC CCATGCTCAG
CTGGTGGTTA ACAGCTGGAG CGAGCACGAC TACTTTACCC AGTATCTGCT GCAGCAGGGC
TTCATCGTGT TCCAGCTGGA TAACCGCGGC TCGGCCCATC GTGGTACTAA GTTTGAGCAG
GTGATCTACA AGCATCTGGG CGAGGCTGAG GTGAATGACC AGAAGGCCGG TGTCGACTAC
CTGCGTAGCC TCAGCTATGT CGATGGCAAG AATATCGCTA TCTATGGCCA TAGCTATGGC
GGCTACATGG CGCTGATGAG CCTGTTTAAG GCGCCGGACT ACTTCAAGGC GGCTATCTCG
GGTGCCCCCG TGACCGACTG GTCTCTATAT GATAGCCACT ACACAGAGCG TTACCTGTCG
CACCCGGCGA CCAATGCCGA AGGCTATGAG GCCTCTAGCG TACTGCCGTA CGTCAAAGGT
TATCAGTCTG GCCTGCTCAT GTATCACGGC ATGGCCGATG ACAACGTGTT GTTTGAGAAC
AGCACCCGTG TCTACAAGGC GCTGCAGGAC GAGGGCAAGC TGTTCCAGAT GATAGATTAC
CCCGGCTCTA AGCACTCGAT GCGCGGCGAG AAGGTGCGCA CTCACCTCTA TCGCTCACTG
GCCGACTTCC TCGACAGGCA GTTGAAGCAC TAA
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| Protein sequence | MTKKWISSAL MAVPMFLSHA VSASQPQLAQ PVGGNEPLTI ERLYASPALA GSSPRGLKLS
PDGKRVTYLA GRAEDQHFYD LWQMEVATGK QSLLLDADKL KSGELSDEEK ARRERQRIYG
QGIMEYFWAD DSQALLIPAS GVLYYYSLSD NKVTPLPVGE GFTTDAKLSP KGHYVSFVRD
QNLYVFDLRT QKLTAMTTDG GGAIKNGMAE FVAQEEMDRM TGYWWAPDES AIAFTRIDES
GVELVTRNEI YADGIKLTEQ RYPYAGKNNV AIALGVVTLA NKQVRWVDLG EDKDIYLPRV
KWLPDSLQLS FQWQSRDQHR LDLRILDLRS QDAPMTMIRE ESDAWVNLNN DLYFLKKSPQ
MLWASERDGF NHLYLFDQQG RQLRQLTKGD WAVDELVHVD EQEGWVYFTG RKASVVEQHL
FRVPLKGGKI EQLSKRSGMH APVFADNQAI YLDYFNSLAQ PPQISLHDEQ GKRLAWVEQN
QVDKSHPLYP YFGQWQLPEF GQIKAEDGQA LQYRLFKPTQ FDATKRYPVV VRVYGGPHAQ
LVVNSWSEHD YFTQYLLQQG FIVFQLDNRG SAHRGTKFEQ VIYKHLGEAE VNDQKAGVDY
LRSLSYVDGK NIAIYGHSYG GYMALMSLFK APDYFKAAIS GAPVTDWSLY DSHYTERYLS
HPATNAEGYE ASSVLPYVKG YQSGLLMYHG MADDNVLFEN STRVYKALQD EGKLFQMIDY
PGSKHSMRGE KVRTHLYRSL ADFLDRQLKH
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