| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0740 |
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| Symbol | |
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| ID | 4924000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 842057 |
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| End bp | 843424 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640162273 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | YP_001092871 |
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| Protein GI | 127511674 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTAGCG CATTTGATAT TTTTAAGATA GGTGTGGGTC CCTCCAGCTC ACACACTGTC
GGGCCGATGA AGGCCGCCAA AGGTTTTGTT GACGATCTGC GTCAACGTGG AGAACTGCTG
AGCATCACCA GTGTTAAGGT GGATATCTAT GGCTCCCTGT CGCTCACCGG CAAGGGCCAC
CATACAGATA GCGCCATCAT CATGGGGCTG GCGGGCAACA GCCCTGAGAC GGTAGATATC
GACTTGACCC CTGAGTTTAT TCGTCAGGTG GCCATGACCT CCTGTCTGCC ACTGGGCACA
GAAGGGCATG GGGTCGACTT TCCGCCCGAG GCCGTGGTGT TTCACCCCGA GGCCCTGGCG
CTGCATGAAA ACGGCATGAC GTTGAGCGCC TATGTCGGTC AGCAGTGTGT CTATCACAAG
ACCTATTACT CCATCGGCGG CGGCTTCATC GTCGACGAGG AACATTTCGG TATGACGGCC
GCCAACGAGG TGGTCTTGCC CTATCCCTTC GCCAATGCCG AGGAGCTGCT GGATCTATGC
CAAGAGACGG GCATGAGCAT CAGCGCCATC ATGATGGCTA ACGAGCGTGC GCTTCATAGT
GAGGCCCATA TTGCCGAGGG TTTCGAGGCG GTATGGCATA CCATGAAAGA GGCTATCGAG
CGCGGCTGTC ACACCGAAGG CGTGTTGGCT GGGCCGCTGC GGGTGCCGCG TCGGGCACCG
GCGCTGTTCC GTCAGCTGGC TACCGGTGAG CGTCTGTCGG CGGATCCCAT GATGATCGTC
GATTGGGTCA ACATGTTCGC CCTGGCGGTG AGCGAAGAGA ATGCCGCCGG TGGCCGGGTG
GTGACCTCAC CGACCAATGG CGCGGCGGGG ATCATCCCGG CCGTGTTGGC TTATTTTGAC
AAGTTCATTC AACCCGTGGG GCCCAAGGAG TACAGCCGCT ACTTCCTCGC CGCCGCCGCA
ATCGGTGGCC TGTATAAGCG CAACGCCTCT ATCTCTGGCG CCGAAGTGGG TTGTCAGGGT
GAAGTGGGGG TTGCCTGCTC CATGGCCGCC GCCGGACTGG CAGAGCTGAT GGGCGGTAAT
CCGGCTCAGG TCTGCATCGC CGCCGAGATC GGCATGGAGC ATAACCTGGG GCTGACCTGT
GATCCGGTCG CCGGTCAGGT GCAGGTGCCC TGTATCGAGC GCAACGCCAT CGCCTCGGTG
AAGGCGATCA ACTCGGCGCG CATGGCGCTG CGGCGCAACA GCGAGCCCAG AGTCAGCCTG
GATAAGGTGA TTGCGACCAT GTATGAGACA GGCAAAGATA TGCATGTGAA GTATCGCGAG
ACCAGTCAGG GTGGCCTGGC GATCAAGGTT ACCAGCATCT GCGCCTAA
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| Protein sequence | MVSAFDIFKI GVGPSSSHTV GPMKAAKGFV DDLRQRGELL SITSVKVDIY GSLSLTGKGH
HTDSAIIMGL AGNSPETVDI DLTPEFIRQV AMTSCLPLGT EGHGVDFPPE AVVFHPEALA
LHENGMTLSA YVGQQCVYHK TYYSIGGGFI VDEEHFGMTA ANEVVLPYPF ANAEELLDLC
QETGMSISAI MMANERALHS EAHIAEGFEA VWHTMKEAIE RGCHTEGVLA GPLRVPRRAP
ALFRQLATGE RLSADPMMIV DWVNMFALAV SEENAAGGRV VTSPTNGAAG IIPAVLAYFD
KFIQPVGPKE YSRYFLAAAA IGGLYKRNAS ISGAEVGCQG EVGVACSMAA AGLAELMGGN
PAQVCIAAEI GMEHNLGLTC DPVAGQVQVP CIERNAIASV KAINSARMAL RRNSEPRVSL
DKVIATMYET GKDMHVKYRE TSQGGLAIKV TSICA
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