| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0709 |
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| Symbol | |
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| ID | 4922433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 803961 |
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| End bp | 806231 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162242 |
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| Product | catalase/peroxidase HPI |
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| Protein accession | YP_001092840 |
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| Protein GI | 127511643 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0376] Catalase (peroxidase I) |
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| TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGAA AAACAGTAAA CAAGCAAACG CTCGCGGCGT TAGTGAGTGC CTTGTTGGTG
TTTAACCCTG CCGTCGCCGA TGAGCAAGAA TCCGCACAGA TGACAAAGCC CAAAGGGGCT
GCTGCCACTG GTACCGCCAA AGCGTTTCAA CCCAAGAGCA AACAGTTTTG GTGGCCCGAT
CAATTGGATC TTTCCCCGCT GCGGGATCAC GACTCCCGCT CCAATCCCTA CGGTGAGAGT
TTCGACTACG CCAAGGCCTT CAACTCGCTG GATCTCGACC AGGTAAAAGC CGATATCGAC
CAGCTACTCA CCCAATCGCA GGATTGGTGG CCAGCCGACT ACGGCAACTA TGGTCCTTTC
TTCATCCGCA TGACCTGGCA TAGCGCAGGT ACCTATCGCA CCCTGGATGG CCGTGGTGGC
GCCGGTGGCG GACAGCAGAG ATTCGAGCCG TTAAACAGCT GGCCCGATAA CGCCAGCCTA
GACAAGGCGC GCCGCCTGCT CTGGCCGGTG AAACAGAAAT ATGGTGAGGC ACTCTCCTGG
TCAGACTTAA TTGTACTCGC GGGCAACGTC GCCCTGGAAA ACATGGGATT TAAGACTTTC
GGTTTTGCCG GTGGTCGTAA CGACGACTGG GAGCCAGACA TGGTGTACTG GGGACCGGAG
GTCGAGATGC TCGCCAGCGA TCGTGAAGAC AGAGACGGCA AGCTGCAAAG GCCGTTAGGT
GCGACCCACA TGGGGCTCAT CTATGTTAAT CCGGAAGGCC CGAAAGGGGT GCCAGATCCG
CTAGGTTCGG CCAAGAATAT CCGCACAGCC TTCTCTCGTA TGGCGATGAA TGATGAGGAA
ACTCTGGCAC TTATCGCCGG CGGTCATACC TTCGGTAAGA TGCACGGCGC CCACAAGCCG
AAAGATTGTC TGGGGGCAGA ACCTGCTGCG GCAGGCATCG AAGCCCAGGG GCTGGGCTGG
CACAACAAGT GTGGCAAGGG CCACTCAGAA GACACCATCA CCAGTGGCCT GGAAGGGGCC
TGGACTCAGG CGCCCACCAA GTGGACCTCG CTCTATCTGA GTAACCTGCT GACTTACGAT
TGGCAGCAGA CCCGCAGTCC TGCAGGTGCG ATCCAGTGGA TCCCAACCGA CGAGTCGGTG
CACAAGGCCG TGCCCGATGC TCATGTCAAA GGTAAGTTTC ATGCGCCGGT GATGACCACG
GCGGACCTTG CGCTCAAGTA TGACCCCGAG TATCGAAAGA TTGCCGAGCG CTTCCTGGCC
GACCCGGAAG AGTATCGTCT GGCCTTTGCC AAGGCCTGGT ACAAGTTGAC CCACAGAGAC
ATGGGGCCTG CCCGTAACTT CCTCGGTAAA GAGGTGCCTC AGGGCAACTT CATCTGGCAA
GATCCAATCG ATGATAAGAC CCAATCGCGT CTCAGCGCCG GCGATATCAA GCAGCTTAAA
AAAGCCATCA GCAAGTCTGG GCTGAGCGTT GCCGAGCGTG TGCGCCTGGC CTGGGCGTCG
GCGGCTAGCT ATCGTCAATC AGATATGCGT GGCGGCGCCA ATGGGGCACG TATCGCCCTG
GCTCCGCAGA AGGATTGGAC GGTGAACAAC CCAGCCGAAA CCGCCAAGGT GCTTAAGACG
CTGGAGGCGA TTCGTGCCGA CTTTAATAAG GGCGCCGGCA AGCGTCAGGT TTCCTTGGCC
GATCTTATCG TACTCGCGGG GGCGAGCGCC CTAGAGCAGG CCGCCAAGCA GGCGGGTTTC
GAGGTCGCCG TGCCTTTCAC CCCAGGACGA GGTGATGCCA CTCAGGCGCA GACGGACGAA
AACTCCTTTA GTCTACTGGA ACTGCATGCC GATGGCTTTA GAAACTACTT CGACGTAAAC
CACAGCTATA AGTCGCCCAC CGAGATGCTG GTGGATAAGG CCGACCAGCT GGATCTGACG
GTGCCCGAGA TGACGGTGTT AGTCGGTGGC CTGCGTGCCC TCGATGCCAA CTATCAAGGG
GCGAAGCACG GGGTGTTGAC CCAGCGTCCC GGCACGCTTA ACAATGACTT CTTCGTCAAC
CTGTTAGACA TGTCGACCCT GTGGCAGAAG TCAGATGTCG ATGGCATCTA TCAGGGACTG
GATCGCAGCA GCGGCAAACC TAAATGGACC GCCACCTCGG TGGACCTCAT CTTCGGCTCT
AACTCTGAAC TGCGCGCGGT CGCCGAGGTT TATGCCTTCG ATACCTCTAA GCAGAAGTTT
GTCGATGATT TTGTCGCCGC CTGGGTCAAG GTAATGAATT TAGATAGATA A
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| Protein sequence | MKGKTVNKQT LAALVSALLV FNPAVADEQE SAQMTKPKGA AATGTAKAFQ PKSKQFWWPD
QLDLSPLRDH DSRSNPYGES FDYAKAFNSL DLDQVKADID QLLTQSQDWW PADYGNYGPF
FIRMTWHSAG TYRTLDGRGG AGGGQQRFEP LNSWPDNASL DKARRLLWPV KQKYGEALSW
SDLIVLAGNV ALENMGFKTF GFAGGRNDDW EPDMVYWGPE VEMLASDRED RDGKLQRPLG
ATHMGLIYVN PEGPKGVPDP LGSAKNIRTA FSRMAMNDEE TLALIAGGHT FGKMHGAHKP
KDCLGAEPAA AGIEAQGLGW HNKCGKGHSE DTITSGLEGA WTQAPTKWTS LYLSNLLTYD
WQQTRSPAGA IQWIPTDESV HKAVPDAHVK GKFHAPVMTT ADLALKYDPE YRKIAERFLA
DPEEYRLAFA KAWYKLTHRD MGPARNFLGK EVPQGNFIWQ DPIDDKTQSR LSAGDIKQLK
KAISKSGLSV AERVRLAWAS AASYRQSDMR GGANGARIAL APQKDWTVNN PAETAKVLKT
LEAIRADFNK GAGKRQVSLA DLIVLAGASA LEQAAKQAGF EVAVPFTPGR GDATQAQTDE
NSFSLLELHA DGFRNYFDVN HSYKSPTEML VDKADQLDLT VPEMTVLVGG LRALDANYQG
AKHGVLTQRP GTLNNDFFVN LLDMSTLWQK SDVDGIYQGL DRSSGKPKWT ATSVDLIFGS
NSELRAVAEV YAFDTSKQKF VDDFVAAWVK VMNLDR
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