Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0698 |
Symbol | |
ID | 4923609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 791670 |
End bp | 793052 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640162231 |
Product | Na+/H+ antiporter NhaC |
Protein accession | YP_001092829 |
Protein GI | 127511632 |
COG category | [C] Energy production and conversion |
COG ID | [COG1757] Na+/H+ antiporter |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGACG CGACAGCCTT AAGTCTTATC CCACCTGTGG TGGTCTTGGT GTTAGCGGTT TGGCTACGCC GTCCAATCCT TTCGTTAATC ATAGGTGCCT TAGTGGGTCT TGTCTTGTAT CAACCCGATC AGGTGCTGAA TAACTTCTCC GATATCTCGC TCTCTGTCAT GGCCGATGAA ACCATAGGTT GGTTGATTCT GGTCTGTGGC GGTTTTGGCG CCCTGATCGC CCTCCTGGTT AAGACGGGGG GGTCTATGGC CTTCGGTCGC CATGCGCTCA AGTATGCCAA GGGGCCTAAG TCATCTCTGC TGATGACCTT TATCCTGGGC GTGGTGATCT TTATCGACGA CTACCTCAAT GCCTTGACTG TGGGGTCGAC CATGAAGTCG GTGACCGACA AGTTTAAGGT GTCGCGGGAG ATGCTGGCCT ATGTGGTGGA CTCTACCGCC GCGCCCATCT GTGTGCTGGT GCCGCTATCG ACCTGGGCCG TCTTCTTCGG CGGCCTGCTG GTGGACAACG GCGTGGCGGG CGAGGGCCAG GGGATCAGCG TCTATATGTC GGCCATTCCT TACATGCTCT ACGCCTGGTT GGCGGTGGCC ATGGTGCTGC TGGTGATCCT GGGCATAGTG CCTGCTTTTG GCCCGATGAA GAAGGCGCAG CTGGCGGCCA TGGCGGGTAA ACCGGCCAAG GCGGTCGATG CCATCGACGA GGTGCAGACC TCGGATGATT ACAGCGTCAA GGCGATCGAA GAGGAGTTTA AGCATGCCGA TAATCTGGGC AAGCTGCATA ACTTCATGGT GCCAATAATC TTGCTGGTGG GCTTTACCGT CTACTTCGAC ATCGACGTGC TCAAGGGGCT GATCGCCACG TTGGCGGTGA CCCTGCCTTA CTATGGCGTG CAGCGTCTGA TGCCTCTGTC AGAGATGATG GAGCAGATGC TCGACGGCTT TAAGTCTATG CTGCCGGCCA TAGGCACGGT TATCGCCGCC TTCGTGTTTA AGGATGTCTG TGACAAGCTG ATGCTGCCGC AATATGTGAT TGGCAATCTG AGCCCCTTCA TGACCTCACA GTGGCTGCCG GCCGTGGTCT TCCTGACCAT GTCGATTCTG GCCTTCGCCA CTGGCTCTAG CTGGGGGATC TTCGCGGTAT CTATCCCTAT CGTGATGCCT CTGGCCCAGG CGGTGAATGC CGATATTCCT CTGGTGATCG GCGCCTTGTT GTCGGCCTCA TCCTTCGGTA GTCAGGCCTG TTTCTATTCT GACTCTACCG TGCTGGCGGC CCAGGGCTCA GACTGTAACC TGGTGAGCCA TGCGGTGACC CAGCTGCCCT ACGCTCTGCT GGCGGCGGGA CTGACCTTTA TCGGTTTCCT TATCTTGGCC TAA
|
Protein sequence | MSDATALSLI PPVVVLVLAV WLRRPILSLI IGALVGLVLY QPDQVLNNFS DISLSVMADE TIGWLILVCG GFGALIALLV KTGGSMAFGR HALKYAKGPK SSLLMTFILG VVIFIDDYLN ALTVGSTMKS VTDKFKVSRE MLAYVVDSTA APICVLVPLS TWAVFFGGLL VDNGVAGEGQ GISVYMSAIP YMLYAWLAVA MVLLVILGIV PAFGPMKKAQ LAAMAGKPAK AVDAIDEVQT SDDYSVKAIE EEFKHADNLG KLHNFMVPII LLVGFTVYFD IDVLKGLIAT LAVTLPYYGV QRLMPLSEMM EQMLDGFKSM LPAIGTVIAA FVFKDVCDKL MLPQYVIGNL SPFMTSQWLP AVVFLTMSIL AFATGSSWGI FAVSIPIVMP LAQAVNADIP LVIGALLSAS SFGSQACFYS DSTVLAAQGS DCNLVSHAVT QLPYALLAAG LTFIGFLILA
|
| |