| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0696 |
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| Symbol | |
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| ID | 4922547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 789076 |
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| End bp | 789990 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640162229 |
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| Product | ribokinase |
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| Protein accession | YP_001092827 |
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| Protein GI | 127511630 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | [TIGR02152] ribokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAGAC TGTTAATCCT CGGCAGTGCC AATGCCGATC ATGTGATGAA CCTGGAACAC
CTGCCTAGCG CAGGACAGAC TCTGATGAGT CGCGGCTATA GGCTGGAACA CGGCGGCAAG
GGGGCTAATC AGGCGGTGGC CGCCGCACGC CTTAGCAAGG ACGAGACCCG GGTCGACTTC
ATCTGTCATC TGGGCCGGGA CGCCATAGGT CAGGCGATGG CCCAGGCCTG GCAGCAAGAT
GGCATAATGC CCTACGGCAT CACCTATACG GACGATCAAC CCACAGGCAC GGCGATGATC
TTCGTCGCCG ATAAAGGCGA GAACATCATA GGCGTCTCAG CCGGCGCCAA CGCGACCCTG
ACCCCCGAGG CGCTCGAGGC CCATCTTGAG CTGATCGAAA AGGCCGATTA TCTGCTGGTG
CAGCTGGAGA CCCCGGCGGT GACTGTGCTG GATGCCTTAA AGCACGCCAA GAAGCATGGC
GTGACCACCA TACTCAATCC CGCGCCGGCC ATGGTGATCG GCAAAGATCT GTTCCGCCTG
GTGGATGTGA TCACCCCCAA CGAGACAGAG GCCGAAGCCA TCACAGGCAT AGAGGTGACC
GATGAGCAGA GCGCCAGAAT GGCGGCGCAG ATGCTGCATC AATTCGGGCC GCAGACGGTG
ATCATCACCC TGGGCAAGCA AGGTGCCCTG CTCAGCACCA AGGACTATTG CGCCCTGATC
CCAGGCGTTC AGGTGAAAGC CGTAGACACG GTCGCCGCCG GCGATACCTT TAACGGCGCC
CTCATGGTGG CCCTTGGCGA GGGCAAGTCT GTCGAGGAGG CGGTCGCCTT TGCCCACCGC
GCCGCCGCCA TCTCGGTGAC CCGCGCCGGT GCCCAGCGCG CCATCCCCTA TCGCCACGAA
CTGGCAGATA TCTAG
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| Protein sequence | MTRLLILGSA NADHVMNLEH LPSAGQTLMS RGYRLEHGGK GANQAVAAAR LSKDETRVDF
ICHLGRDAIG QAMAQAWQQD GIMPYGITYT DDQPTGTAMI FVADKGENII GVSAGANATL
TPEALEAHLE LIEKADYLLV QLETPAVTVL DALKHAKKHG VTTILNPAPA MVIGKDLFRL
VDVITPNETE AEAITGIEVT DEQSARMAAQ MLHQFGPQTV IITLGKQGAL LSTKDYCALI
PGVQVKAVDT VAAGDTFNGA LMVALGEGKS VEEAVAFAHR AAAISVTRAG AQRAIPYRHE
LADI
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