| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0677 |
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| Symbol | |
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| ID | 4922607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 771168 |
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| End bp | 772799 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640162210 |
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| Product | hypothetical protein |
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| Protein accession | YP_001092808 |
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| Protein GI | 127511611 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3488] Predicted thiol oxidoreductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0593754 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAATT GCTTAACAAA ACCCTCCGCC CTGTTGGCGG CCTTGACCCT GGCTCAGACA
TTGGCATTGG CCGGTTGTGG CGGCTCGGGT GATGAGATAG AAGTGCCAGA GCCCGAGAAG
CAGTATCCCG ACTATACCCA GGTGACGGCA TTGGGCGGTG ACACCACCAC CTTCGATGCC
TCGAGTTCGG GTCACGGCTA CTCGACGCCG GCGCTGAATC TTAACCAGAC GCAGCTCGCC
CAGCACCTAA GCGGCGACCT GAATTTTGAG ACCGCCTTTA CCACGGCGCC CAACGAGGAG
CATCCCGAGC TCGACGGCCT GGGCCCAGTG TTCAACAACG CCGACTGTAA CTCCTGCCAT
CAGCGCGACG GTCGTAACTC GACGCCGATA GTGCCAGCGG GGCAAACGCG CATTAAGCTC
GGCTCCGAGG CGGGGATCTT CCTGCGTATC AGCAAGGCGC CGGACCAGCC TTGCCTGCAA
GGGACGGCAG CGAACAACTA CTGCGCGCCT ATTCCTGTGC CCAACTTCGG CACTCAGCTG
TTTCACCGCG GGGTGCTTAA GGCCAGGGAA GACTGGCAGC AGAACCTGTT CGGCGGTCAG
GCGGATGTCT ACCTCTCCTA CGAGCTAAAG ACGGTAACTT ATCCCGACGG CACTGAGGTG
ACGCTCAAAA GGCCACTGTT TGCGGTGGAA AATCCCTTCG ATGCGCCGGG TGAGAGCCTC
AACAGCAGCA ACGTCACCTC TGAGCTTTTG CAGGGCGATG TCTTGATGGG CTGGCGTACC
GGCATGCCTG TGTTTGGTCT TGGGCTGCTG GAGGCGATTC CCGAGGCGAG TATTCTGGCG
CTGGTGGATG AAAACGATGC CGACGGCGAT GGCATCTCAG GACGGGCAAA CTATGTGTTC
GACGCCGTCA AGGCGCAGCG CGGCGAGAGC CATCCTGTCT CTTTGGGGCG TTTCGGCTGG
AAGGCCAATA CCCCCAGCGT GCGGGTGCAG TCATTGGGCG CGCTGCGCGG CGACATTGGG
ATCACCAACC CCTTGTTTCC CGAGGAGAGC ATCCAGGGCA CCAGCATGCA TGACAGCTAC
CTAACCCGCA CCGGGTTTGT CGATACCGGC AGCGGCGTCG ACGGTGAGCC AGAGGCGAGC
GCCGAGTTCA GCGACGACGT GGTCTTCTAC GCCGAGACCC TGGCGGTGCC GGCGAGGCGG
CAGGTGGATG ATGTCAAGGT GAGGGAAGGG GCGCGGCTGT TTGAGCAGGT CAACTGCAGC
GGTTGTCACC AGCCCAAGTT TGTCACCAAG AGCAGCGGCG AGATTGGCGG GCTGCCCATG
ATAGAGGCCC TCAAGGGGCA GACCATCTAT CCCTTCAGCG ATATGTTGCT CCATGATATG
GGTGAAGGCT TGAGTGATGC TCGTCCCGAC TTTCTGGCCA GCGGTAGCGA GTGGCGCACC
CGGCCGCTTT GGGGCATAGG CCTGACTCAG ACGGTCAATC CCCAGGCGGG CTTCTTGCAC
GATGGCCGCG CGGCGAGTGT GGAGGAGGCG ATCCTCTGGC ATGGCGGCGA GGCCCAGGCC
AGTACCGATA AGTTCATGGC CCTGACCCAA GAGGAGCGCT CGCAACTGCT GGCCTTCGTG
ATGTCCCTCT AA
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| Protein sequence | MMNCLTKPSA LLAALTLAQT LALAGCGGSG DEIEVPEPEK QYPDYTQVTA LGGDTTTFDA
SSSGHGYSTP ALNLNQTQLA QHLSGDLNFE TAFTTAPNEE HPELDGLGPV FNNADCNSCH
QRDGRNSTPI VPAGQTRIKL GSEAGIFLRI SKAPDQPCLQ GTAANNYCAP IPVPNFGTQL
FHRGVLKARE DWQQNLFGGQ ADVYLSYELK TVTYPDGTEV TLKRPLFAVE NPFDAPGESL
NSSNVTSELL QGDVLMGWRT GMPVFGLGLL EAIPEASILA LVDENDADGD GISGRANYVF
DAVKAQRGES HPVSLGRFGW KANTPSVRVQ SLGALRGDIG ITNPLFPEES IQGTSMHDSY
LTRTGFVDTG SGVDGEPEAS AEFSDDVVFY AETLAVPARR QVDDVKVREG ARLFEQVNCS
GCHQPKFVTK SSGEIGGLPM IEALKGQTIY PFSDMLLHDM GEGLSDARPD FLASGSEWRT
RPLWGIGLTQ TVNPQAGFLH DGRAASVEEA ILWHGGEAQA STDKFMALTQ EERSQLLAFV
MSL
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