| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0566 |
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| Symbol | |
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| ID | 4922454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 642172 |
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| End bp | 642450 |
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| Gene Length | 279 bp |
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| Protein Length | 92 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640162099 |
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| Product | RNA chaperone Hfq |
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| Protein accession | YP_001092697 |
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| Protein GI | 127511500 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0286817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.207792 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGG GGCAATCTTT ACAAGACCCA TTTTTGAACG CATTACGACG TGAACGCGTT
CCGGTATCTA TCTACCTAGT TAACGGTATC AAGCTTCAGG GACAAGTTGA GTCATTCGAT
CAGTTTGTTA TTTTATTGAA GAACACTGTC AGCCAGATGG TTTATAAGCA CGCTATCTCT
ACCGTGGTGC CTGCGCGTCC ATTTAACGTG AGCAGCCATC ACAATACGCC TAACCAGGCG
GCGGGTTACA ATGCATCACA TGACGATAGC GCTGAGTAA
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| Protein sequence | MAKGQSLQDP FLNALRRERV PVSIYLVNGI KLQGQVESFD QFVILLKNTV SQMVYKHAIS
TVVPARPFNV SSHHNTPNQA AGYNASHDDS AE
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