| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0562 |
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| Symbol | |
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| ID | 4921201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 637476 |
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| End bp | 637949 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640162095 |
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| Product | hypothetical protein |
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| Protein accession | YP_001092693 |
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| Protein GI | 127511496 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0802] Predicted ATPase or kinase |
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| TIGRFAM ID | [TIGR00150] ATPase, YjeE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000200674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.209641 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACACCAG TAAAAGTTTA TCTTGAAAAT GAAGCAGAAA CCGTTAGCTT AGGTCAAAGG
CTAGCCAGTG CGATCAAGCC GCCATTGACC CTCTATTTGA GTGGTGAACT GGGGGCGGGT
AAAACAACCT TTAGTCGTGG CCTCATTCAG AGCCTGGGAC ATAAGGGGGC GGTGAAGAGT
CCGACCTACA CGCTGGTTGA GCCCTATGAG CTAGGTGATA TTGATGTGTA TCATTTTGAT
CTATATAGAC TAAGTGATCC AGAAGAGCTC GAGTTTATGG GGATTCGAGA CTACTTTACC
GAGTCGAGCC TGTGTATTGT CGAGTGGCCC GATAAGGGCG TCGGCCTACT GCCCGAGGCG
GATCTGGCGA TCCATATTCA GTATCATCAA CAGGGCCGAG AGGTCATGCT GACGGCGCAC
TCGCGCGCCG GAGAGATTTT GTTAGATAGT TTACATAATA ATGATAAGAA CTGA
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| Protein sequence | MTPVKVYLEN EAETVSLGQR LASAIKPPLT LYLSGELGAG KTTFSRGLIQ SLGHKGAVKS
PTYTLVEPYE LGDIDVYHFD LYRLSDPEEL EFMGIRDYFT ESSLCIVEWP DKGVGLLPEA
DLAIHIQYHQ QGREVMLTAH SRAGEILLDS LHNNDKN
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