| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0425 |
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| Symbol | |
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| ID | 4924394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 478213 |
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| End bp | 479313 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640161954 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001092556 |
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| Protein GI | 127511359 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACTCG CTAGCCTGAG GCGGATAAAA TCGATCACCA CCAAGGAGAT CCGCCAACTC
AAACGGGATC GCATTACCTT CGGCATGGTG GTGATGATCC CCCTGATCCA GCTGTTGCTG
TTTGGCTACG CCATCAATAC CGATGTGCGT AACGTGCCCG TGGTGGTGGT GGACCAGAGC
CACTCCGCCG CCGGACGCTG GATCGTCGAG GCCGTCAAGG TGACTCAGGT GGTCAGCATA
GAGAAGCACT ATGCCAGCGC CGAGGAGGCC GAGGCCGCCA TCACCCGTGG CGAGGTGCGC
GCGGCGCTGA TATTGCCGCC TAACCTTACC GAGAAGCTCG CCAACGGCGA GACACTGGGC
CAATGGGTGG TCGACGGTTC GGATACTATG GTGGCCTCGG CCATCAGCCA GCTGAGGAAC
ATGCCGCTGG ATCAGATCAC GGGCCAAGAC ACCCAGCGGC TGCCCACCTT CGAGGTCGCC
CTCTTCTACA ACCCAGAGCA GCGCTCGGCG GTCAACATAG TGCCAGGGCT GATCGCGGTG
ATCCTCACCA TGACAATGAT CCTCTTTACC TCGGCGGCCA TAGTAAGAGA GCGCGAACGT
GGCAACCTGG AGCTGCTGAT CACCACCCCC ATCAAGCCCT TAGAGTTGAT GCTCGGTAAG
ATAGTCCCCT ATATCTTGGT GGGGCTGGTG CAGATGACCA TCATCCTCGG GCTTGGGCAT
CTTATCTTCG ATGTGCCCAT CAATGGCGCC ATCGCCCAAC TGCTGATGGG CACCCTGCTC
TTCATCGCCG CCAGCCTCAC CCTGGGGCTG ATCATCTCCA CCATAGCCAA GACCCAGCTA
CAAGCGATGC AGATGACTAT CTTCATCATA CTGCCCACTA TCTTGCTGTC GGGCTTCATG
TTTCCCTTCG AGGCCATGCC TAAGCCGGCC CAGTGGATCG CCGAGCTGCT GCCCGCCACC
CACTTCATGC GCATCATTCG CGCCATCGTC CTGCGGGGCG GCGCCCTGAG CGACATGCAG
TTCGATGCCC TCTGGCTTAT CGGCTTCACC CTGGTCGGTA TCTTGGTCGC CTCGCTGCGC
TTCAATAAGC GCCTCGATTG A
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| Protein sequence | MLLASLRRIK SITTKEIRQL KRDRITFGMV VMIPLIQLLL FGYAINTDVR NVPVVVVDQS
HSAAGRWIVE AVKVTQVVSI EKHYASAEEA EAAITRGEVR AALILPPNLT EKLANGETLG
QWVVDGSDTM VASAISQLRN MPLDQITGQD TQRLPTFEVA LFYNPEQRSA VNIVPGLIAV
ILTMTMILFT SAAIVRERER GNLELLITTP IKPLELMLGK IVPYILVGLV QMTIILGLGH
LIFDVPINGA IAQLLMGTLL FIAASLTLGL IISTIAKTQL QAMQMTIFII LPTILLSGFM
FPFEAMPKPA QWIAELLPAT HFMRIIRAIV LRGGALSDMQ FDALWLIGFT LVGILVASLR
FNKRLD
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