| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0420 |
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| Symbol | |
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| ID | 4924357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 473839 |
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| End bp | 475071 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640161949 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001092551 |
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| Protein GI | 127511354 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCTTG CCAGCCTGCG CGCCCTGCCA AGCGAGATGC GCCAGTATCT GCTGGTGACG
GGCAACTACT GGGCCTTCAC ACTCACCGAC GGCGCGCTGC GCATGCTGGT GGTGCTGCAT
TTTCACCAGC TTGGCTATTC GCCGCTGTCC ATCGCCATGC TGTTCCTCTT CTACGAGATC
TTCGGCGTGG TGACCAATCT GGTGGGCGGC TATCTGGGGG CTCGCCTCGG GCTCAATCGC
ACCATGAACA TCGGCCTCGG GCTGCAGGTG GCGGCCTTGG CCATGTTGTT GGTGCCCAGT
AGCTGGCTTG TCGTGCCTTG GGTGATGGCG GCCCAGGCGC TATCGGGGAT CGCCAAAGAT
CTCAACAAGA TGAGCGCCAA GAGCAGCGTG AAGATGCTGG TGGCCAAGGG GGAAGAGGAC
AGGCTGTACA AGTATATTGC CGTGCTGACC GGCTCTAAGA ATGCCCTCAA GGGGGCGGGC
TTCTTCCTCG GCGGCGCCCT GTTGGCGCTG CTGGGCTTCA AGGGGGCGAT CGGTCTGATG
GCGGCGCTTC TGGCTATCGT CTGGCTGGTG AGCATCATCA AGCTCAAGCA AGATCTCGGC
AAGGCCAAGA ACAAGCCTAA GTTTACCGAG TTGTTTTCCA AGAGCCGGGC GATCAACATA
CTCTCGGCGG CGCGCATGTG CCTGTTTGCC GCCCGCGATG TCTGGTTTGT GGTGGCACTG
CCTGTCTATC TCGCCAGTCA ATTTGGCTGG GACCACTATC AGGTGGGTGG CTTCCTGGCG
CTGTGGATCA TCGGCTATGG CGCGGTGCAG AGCCTGGCGC CCAGGGTTAC GGGCAAGGCC
AGCGGCCAGG TGCCCGACGG GCGCAGCGCC ATGTGGTGGG CAAGTGCCCT GACAATTATC
CCCGCGCTGA TCGCCTATTT GATGAGTGGT GAGTTGGCGG CACTGGCGCC CGGGTTCAAT
CTCGGCGTGT TGCTGCTCGG CCTGATGCTG TTTGGCGCCG TGTTTGCGGT GAACTCCTCC
CTGCACAGTT ACCTGATTGT CAGCTATGCC AGCGACGATG GCGTCTCCCT GGATGTGGGC
TTCTACTACA TGGCTAATGC CATGGGGCGC CTGCTGGGCA CTATCCTCTC TGGCTGGGTG
TACCAGGCCT ATGGGCTGGG GGCTTGCCTG TGGATCTCTA CAGGGCTGCT CGGGCTGACG
GTTGTGATAA GCGTGGGGCT GCCGAGGCGC TAG
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| Protein sequence | MMLASLRALP SEMRQYLLVT GNYWAFTLTD GALRMLVVLH FHQLGYSPLS IAMLFLFYEI
FGVVTNLVGG YLGARLGLNR TMNIGLGLQV AALAMLLVPS SWLVVPWVMA AQALSGIAKD
LNKMSAKSSV KMLVAKGEED RLYKYIAVLT GSKNALKGAG FFLGGALLAL LGFKGAIGLM
AALLAIVWLV SIIKLKQDLG KAKNKPKFTE LFSKSRAINI LSAARMCLFA ARDVWFVVAL
PVYLASQFGW DHYQVGGFLA LWIIGYGAVQ SLAPRVTGKA SGQVPDGRSA MWWASALTII
PALIAYLMSG ELAALAPGFN LGVLLLGLML FGAVFAVNSS LHSYLIVSYA SDDGVSLDVG
FYYMANAMGR LLGTILSGWV YQAYGLGACL WISTGLLGLT VVISVGLPRR
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