Gene Shew_0373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0373 
Symbol 
ID4920606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp420651 
End bp421046 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content56% 
IMG OID640161902 
Producthypothetical protein 
Protein accessionYP_001092504 
Protein GI127511307 
COG category[S] Function unknown 
COG ID[COG3536] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCCC AAAGCGATAC GCCCAAGGTC ACAGGGCTCA AACTCAAACG CAAGTCGCGC 
CAGCTGGAGA TAAGTTTCGA CAACGGTCAG CAATTTACCT TGAGCTGCGA ACTCCTAAGG
GTCTACTCCC CCTCGGCCGA GGTCCATGGT CACGGCAATC CCGTGCTGGT CACCCACAAG
AAGAACGTCA ATATCAACGC CATCACCCCT GTAGGCAACT ATGCAGTCAA GCTGGTGTTC
GACGACGGCC ACGACACAGG CCTCTACTCT TGGAAGGTGC TCTATGATCT GGCCAGCAAT
CAGGTAGATC TGTGGGAGAA CTATCTGGCC AGACTACGCG CCGCCAAGGC CAGCCGCGAG
CCGCTGATCG ATATGGCCGT GAAGTATCAC ACCTAA
 
Protein sequence
MTPQSDTPKV TGLKLKRKSR QLEISFDNGQ QFTLSCELLR VYSPSAEVHG HGNPVLVTHK 
KNVNINAITP VGNYAVKLVF DDGHDTGLYS WKVLYDLASN QVDLWENYLA RLRAAKASRE
PLIDMAVKYH T