| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0348 |
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| Symbol | |
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| ID | 4920993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 396809 |
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| End bp | 398848 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640161876 |
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| Product | cytochrome c, putative |
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| Protein accession | YP_001092479 |
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| Protein GI | 127511282 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACGAT GGAAACACAA GGTAGCCTTA AGTGCGCTAT TTTGTTTCGG TGCCATTGCC
AATGTGAATG CCGCTGGTGG TAAATACAAC AGCGTGCCCG AGATGGGCAA GACCGCCAAA
GAGGCGATAG CAAACTATCA GGGCACGGAA CAGGTTAATG GTGTTAAAAC CCTGCAAGAC
TATATTGTTC AAGAAGCCGA GCTGTTTGAT TTCCTGTTTG AAAACCACCC TATGTTCAAA
TATCAGGAAG CGGGCAATCT GGTCGGCGAC TACCACATCA GCGACCGGGG TGAAGAGTAT
CTGGATACTG GTCACAGCCC CGAATACAGC AAGAAGGCGG GCAAACCCAG AGCGGTCCAG
TACCGTCTTG GCGCCAAGTC GATTCTGGAT TATCCCAACA ACTTCGTCGG CCCGGAAAAG
TGCGCCGAGT GTCACGCGAC TCAATATGAG AAGTGGAGCC GTTCACGCCA CGCCAAGACG
ATCCGTTTCC CCGGGGAGCA CCCAGAGGTG GATAACGATC TCAACAAGAC AATGTACGGC
ACTAAGGACA CCTCTATTCT ACCCGACGGC ATCACGCCGG ATGTGATCTA TGCGACCGTG
GGTACGCCCA GAACCAAGTA TGGCTTCATC GATGCCTGGT TGGTGCGTGG TTCATACCAT
ATCGAGGGTG GTTTGCTTAA GGATGGCACG GGCAAGATGG TGGCCGGTGC TAACCAGTTC
TCACGTGGCT GGGCCGAGTG GCTGACTCCC GAGATGGCCA AGAAGATCAA TGCGGTGATC
CCTGAGTTTC CAACGACCCT GGAAGCCTAT GGCGGTTCAG GCTCTCACCA GTGGGGTATG
AGCTCCTATG GTGCCAAGTA CCGTAAGGAG ATGCTGTTTC AACCCGCCAG CTCCTACTGT
GAGGTATGCC ATACTTTCAA GTTCGACTTT AAGACCAAGC AGGAATACTT CGACGCCTTG
GGCGATCCTA AGAAACTGCA GGAACACACC ATCAGTAAAG GGATCGCCTG TGAAGAGTGT
CACGGCGCTG GCGGCCACTT AGATGGTGGT ACCGGCGGCA TGCAGTCTAA CTGCGAACGC
TGTCACCAAC GCTTCCAGTA CGACCCTGCC ATGGCCGAAA CCCCTGCCGC CCAGGAGAAG
CCCGAGCTGG CCTTCGGCGT GAAGATGAAG TCGCTCTGTC CTTCTTGTGG TACCGAGGGC
TCGCAGATGT ATGGCTCGGC GCACTATGAG AAAGGGATGC GTTGTACCAC CTGTCACGAT
CCTCACGAGG TTACAGACGG TACCTGGATG TCAGGCATCA CCAAGCCTAA GTTGAAGACA
GACTGTAAGG ACTGCCACGA GGCGCAGACT GTGATTGCCA GCAACACAGA CACCCACGCC
AACCAGACCT GCCAGAGTTG TCACATGCCT AACATGGGTA GCTGTGAAAA CTTCAAGGCG
ATGCAGTTCC CCGATCAGGC TGGCTTCGAT GCGGTGCGTA AGTCGCACAT GTGGAAGATC
GATGTCGACC CTGAGCGTAA GACACTCAAC CCGCCAGAAG GTCAGCCAAG GATCCAAGGA
CCTAAGGGTG CCAAGGGCTG GACAGTGGCC AAGAACGAAG AGGGTCGTAC CTACCTGGAC
CTCATGTGGT CTTGTGCCCG CACCTCTATC TCAGATCACG ACGTAGTGGA AAACAAGGGT
TGTCATAGCC AGTTCCAGTC TGAACTCGAG ACTGGCCTGC ACTACAAGGA TCAGCTGGAG
ATCTACGGTG AAGTGATGAA GTGGCAGAAG CCTATTAAAG AGGTCTTCGG TCAGGTTGAG
CAGGCGCTGG TGCGTATCGA TCAGCTGCTC GAGGTCACCA AGTTGTCTAC CGAAGACAAG
ACTCAGGTGC TGATGCTGGC CGAGAAGGCC CAGGCCACAG TGGATCTGAT CAAGCAAGAT
GGCTCTTGGG GTGTCCATGG CTTCCGTTAT AGCCAGAAAC GTCTCGATGC GGCCCTCACC
TATGTGACTC AGGCGCAGAA GATCTTAGAC GGCAGCGGCT ATTCGGCCAA GGCCCACTAA
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| Protein sequence | MRRWKHKVAL SALFCFGAIA NVNAAGGKYN SVPEMGKTAK EAIANYQGTE QVNGVKTLQD
YIVQEAELFD FLFENHPMFK YQEAGNLVGD YHISDRGEEY LDTGHSPEYS KKAGKPRAVQ
YRLGAKSILD YPNNFVGPEK CAECHATQYE KWSRSRHAKT IRFPGEHPEV DNDLNKTMYG
TKDTSILPDG ITPDVIYATV GTPRTKYGFI DAWLVRGSYH IEGGLLKDGT GKMVAGANQF
SRGWAEWLTP EMAKKINAVI PEFPTTLEAY GGSGSHQWGM SSYGAKYRKE MLFQPASSYC
EVCHTFKFDF KTKQEYFDAL GDPKKLQEHT ISKGIACEEC HGAGGHLDGG TGGMQSNCER
CHQRFQYDPA MAETPAAQEK PELAFGVKMK SLCPSCGTEG SQMYGSAHYE KGMRCTTCHD
PHEVTDGTWM SGITKPKLKT DCKDCHEAQT VIASNTDTHA NQTCQSCHMP NMGSCENFKA
MQFPDQAGFD AVRKSHMWKI DVDPERKTLN PPEGQPRIQG PKGAKGWTVA KNEEGRTYLD
LMWSCARTSI SDHDVVENKG CHSQFQSELE TGLHYKDQLE IYGEVMKWQK PIKEVFGQVE
QALVRIDQLL EVTKLSTEDK TQVLMLAEKA QATVDLIKQD GSWGVHGFRY SQKRLDAALT
YVTQAQKILD GSGYSAKAH
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