| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0337 |
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| Symbol | rho |
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| ID | 4921931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 382589 |
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| End bp | 383854 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640161865 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_001092468 |
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| Protein GI | 127511271 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTAT CAGAATTAAA AGAGAAGTCG ATTTCAGACC TAGTCATTCT GGCTCAGGAT
ATGAAAATCG AGAACATGGC CCGAGCCCGC AAACAGGACA TTATTTTCGC AATCCTTAAA
GCCCACGCCA AAAGCGGTGA AGATATTTTC GGTGGCGGGG TACTAGAAAT CCTGCAAGAT
GGTTTTGGTT TCCTTCGTAG CGCAGACGGT TCTTACCTGG CAGGTCCAGA CGATATCTAT
GTTTCACCGA GTCAAATTCG CCGCTTCAAC ATGCGCACCG GTGATACCAT TTTTGGTAAA
ATCCGTCCCC CGAAAGAAGG TGAACGTTAT TTCGCGCTAC TGAAAGTCAG TGAAGTCAAC
TTCGACAAAC CCGAAAACTC CCGCAGCAAG ATCCTCTTCG AAAACTTAAC CCCACTTCAT
GCAGAAGAAC GTATCCGAAT GGAACGTGGT AACGGTTCAA CCGAAGATAT TACCGCCCGT
ATTCTCGACC TCTGCTCGCC AATCGGTAAG GGCCAACGTG GCCTGATCGT GGCGCCGCCG
AAGGCAGGTA AGACCTTGCT GCTGCAAAAC ATTGCCCAGA GCATCACCTA CAACAACCCA
GAAGTTGTGC TCATGGTACT GCTGATCGAC GAACGTCCAG AAGAAGTGAC CGAGATGCAA
CGCCTGGTGA AGGGTGAAGT GGTTGCCTCT ACCTTCGACG AGCCCGCCAG CCGTCACGTA
CAGGTAGCCG AGATGGTTAT CGAGAAGGCC AAGCGTCTGG TTGAACACAA GAAAGACGTA
GTGATCCTGC TCGACTCTAT CACACGTCTG GCACGCGCCT ACAACACAGT GATCCCTTCG
TCAGGTAAGG TACTTACCGG TGGTGTTGAC GCCAACGCAC TGCATCGTCC TAAGCGCTTC
TTCGGCGCAG CCCGTAACAT CGAACACGGC GGCAGCCTGA CCATTATCGC CACCGCACTG
GTCGATACGG GTTCTAAGAT GGACGAAGTG ATCTACGAAG AATTTAAGGG TACGGGTAAC
CAGGAACTGC ACCTGTCTCG TAAGGCCGCC GAGAAGCGTG TCTTCCCAGC TATCGACTTC
AACCGCTCGG GTACCCGTCG CGAAGAGAAG CTGACCACAC CAGACGAGCT ACAGAAGATG
TGGATCCTGC GTAAGATCCT CAATCCTATG GACGAAGTTA GCGGCATGGA GTTCCTCATC
GACAAGCTGG CCATGACCAA GACTAACGAA GAGTTCTTCA CCGCGATGAA ACGCGCCAAG
TCTTAA
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| Protein sequence | MNLSELKEKS ISDLVILAQD MKIENMARAR KQDIIFAILK AHAKSGEDIF GGGVLEILQD
GFGFLRSADG SYLAGPDDIY VSPSQIRRFN MRTGDTIFGK IRPPKEGERY FALLKVSEVN
FDKPENSRSK ILFENLTPLH AEERIRMERG NGSTEDITAR ILDLCSPIGK GQRGLIVAPP
KAGKTLLLQN IAQSITYNNP EVVLMVLLID ERPEEVTEMQ RLVKGEVVAS TFDEPASRHV
QVAEMVIEKA KRLVEHKKDV VILLDSITRL ARAYNTVIPS SGKVLTGGVD ANALHRPKRF
FGAARNIEHG GSLTIIATAL VDTGSKMDEV IYEEFKGTGN QELHLSRKAA EKRVFPAIDF
NRSGTRREEK LTTPDELQKM WILRKILNPM DEVSGMEFLI DKLAMTKTNE EFFTAMKRAK
S
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