| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0331 |
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| Symbol | prmA |
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| ID | 4923907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 375851 |
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| End bp | 376732 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640161859 |
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| Product | ribosomal protein L11 methyltransferase |
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| Protein accession | YP_001092462 |
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| Protein GI | 127511265 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2264] Ribosomal protein L11 methylase |
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| TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0201798 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTGGA TCCAGTTAAA GATAGACACA GATAACCAAC ACGCCGAGCA GCTCAGCGAC
ATGCTGATGG AGCTGGGTTC CCTGTCGATC ACCTATGAAG ATGGTAAAGA CACCCCAATC
TACGAGCCTA ACCTGGGTGA GACCCCGCTG TGGAGCCACA CAGTGATCAC CGCCCTGTTC
GAGGCCGATT ATGATCTGGC GCCCGTAGTG GAGATGCTCA AGCTGCAACC TTATTTAGGC
GCCGACTTTA GCCATAAGAT AGAACAGGTC GAAGACAAGG ACTGGGAAAG AGAGTGGATG
GACAACTTCC ACCCGATCCA ATTTGGTCGT CGCCTATGGA TCTGCCCAAG CTGGCGCGAA
GTGCCCGACC CAGAAGCGGT CAACGTCATG CTGGATCCCG GCCTGGCATT CGGCACCGGC
ACCCACCCTA CTACCGCCCT GTGCCTGGAG TGGTTAGACG GCCTGGACTT ACAAGGTAAA
GAAGCGATCG ATTTTGGCTG CGGCTCAGGC ATTCTCGCGG TCGCAGCGCT CAAGCTGGGC
GCCGCCAAGG TCACAGGTAT AGACATCGAC TACCAGGCGA TCGATGCCTC TAAGGCCAAT
GCCGAGCGCA ACCAGGTGGC CGACAAGCTC GACCTGTATC TGCCAGAAGA CCAGCCTGCC
GATCTTAAGG CAGAGGTTCT GGTGGCCAAC ATTCTTGCCG GCCCGCTGCG CGAACTGGCA
CCGCTCATCG CCGAGAAAGT ACAGCCCGGT GGCCTGCTGG CACTCTCAGG CCTGTTAAAG
GAACAGGCCG ACGAGATCAG CCAGCATTAT GCCCAGTGGT TTGACATGGA CGCACCAGTT
CACAAAGAGG ATTGGAGCCG CTTGACAGGC AGACGCAAAT AG
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| Protein sequence | MAWIQLKIDT DNQHAEQLSD MLMELGSLSI TYEDGKDTPI YEPNLGETPL WSHTVITALF
EADYDLAPVV EMLKLQPYLG ADFSHKIEQV EDKDWEREWM DNFHPIQFGR RLWICPSWRE
VPDPEAVNVM LDPGLAFGTG THPTTALCLE WLDGLDLQGK EAIDFGCGSG ILAVAALKLG
AAKVTGIDID YQAIDASKAN AERNQVADKL DLYLPEDQPA DLKAEVLVAN ILAGPLRELA
PLIAEKVQPG GLLALSGLLK EQADEISQHY AQWFDMDAPV HKEDWSRLTG RRK
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