| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0299 |
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| Symbol | |
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| ID | 4920625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 321214 |
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| End bp | 321822 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640161823 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001092430 |
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| Protein GI | 127511233 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATAGAGA AAAAATTAAC TCGCTCGGAG CTGAAACGCG CGGCCATCGT CGAGGCAGCC
AGTGTGGAGT TTCAAAATAA GGGATTTAGC CTAGCGAGTA TGGATGACAT TGCCAAACGT
GCCGATGTGT CCAAGCGCAC CGTGTACAAC CATTTCCCCA GCAAAGAGGC GTTGTTTAGT
GCCATCATGC TCGAGATGAT GGAGATGCTG TGCGCCTTCG AATCTTTACC CTTCAGCGCC
GAGGAGAGCC TGGCTTCACA GTTGACCCAA TTGGTGCAGC ACGAGATTAA GCTGTTAAGT
GCTAAGGGGT TTATCGATAC GGCCAGGGTG ATTATTGCCG AGGCGATTCA CAAGCCGGAG
CTGATTCAAG ACGCAATGTC GGAGTTTAGT AAGCAGGAGT CGCCACTGGC GAACTGGTTC
AATCAGGCAA TCGCCGCCGG TGCGTTAAAG GCGAAGGATA GCGAGATCTT GGTGGTTCAG
TTTACCGCGG TGATCAAGGC CTACTGCTTC TGGCCTCAGT TGATCCAGGG TGAGCCTCTG
CCGAGCCAGG CCAAGCTCGA TGAGATAACC CAAACTGTGG TCGAGATGAT CATCAAGCAA
TATACCTAG
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| Protein sequence | MIEKKLTRSE LKRAAIVEAA SVEFQNKGFS LASMDDIAKR ADVSKRTVYN HFPSKEALFS
AIMLEMMEML CAFESLPFSA EESLASQLTQ LVQHEIKLLS AKGFIDTARV IIAEAIHKPE
LIQDAMSEFS KQESPLANWF NQAIAAGALK AKDSEILVVQ FTAVIKAYCF WPQLIQGEPL
PSQAKLDEIT QTVVEMIIKQ YT
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