| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0294 |
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| Symbol | |
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| ID | 4924049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 315341 |
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| End bp | 316483 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640161818 |
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| Product | alanine--glyoxylate transaminase |
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| Protein accession | YP_001092425 |
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| Protein GI | 127511228 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGCAG CACCCAAAGT TACCCCTTTT AATCCCCCAC GCCGAGTCTT GATGGGCCCG
GGCCCGTCGG ATGTCTATCC CGAGGTTCTG GCGGCGCAGG CAAGGCCGAC CATAGGCCAC
CTGGATCCCC TGTTTGTCGG CATGATGGAT GAGCTTAAGT CGCTTATCCA ATATGCGTTC
CAGACCGAAA ATGCCATGAC GTTAGCGGTA TCAGCCCCAG GCAGCGCTGG CATGGAAACC
TGTTTCGTTA ACCTGGTGGA GCCAGGCGAG AAGGTGATCG TCTGTCGTAA CGGCGTGTTT
GGCGAGCGTA TGCGCCAGAA TGTCGAGCGT GTCGGTGCGA CCGCCGTGGT GGTGGACAAC
GAGTGGGGCA CGCCGGTATC ACTGAGCGAT GTCGAGGCGG CGCTTAAGGC TCATCCCGAT
GCCAAGTTTC TCGCCTTCGT GCATGCCGAG ACCTCAACCG GTGCGCTGTC GGACGCCAAG
GGCTTGTGTC AGCTGGCCAA GGCCCACGAT TGTCTGTCGA TCGTCGATGC GGTGACTTCC
CTTGGCGGCG TGGAGCTCAG GGTCGACGAG TGGGGCATAG ATGCTATCTA TTCGGGCAGC
CAGAAGTGTC TCTCCTGTGT GCCGGGCTTG TCACCTGTCT CTTTCTCGCC GGCGGCAGTA
GAGAAGCTCA AGGCGCGTAA GACGCCGGTG CAGAGCTGGT TCCTGGATCA GAGCCTGGTC
ATGGGTTACT GGAGTGGCGA TCAGGGCGCG GGCGGTAAGC GCAGCTATCA CCATACGGCG
CCGGTCAATG CCCTGTATGC CCTGCATGAG TCGCTACGCT TGCTGGCCGA AGAGGGGCTG
GAAAATGCCT GGGCCCGTCA TCACTCTATG CACGCATTAC TGCGTGACGG ACTGGAAAAT
CTGGGGCTTA AGTTTGTGGT CGAGGAGGGC TCGCGTCTGC CACAGCTCAA CGCAGTTTAT
ATTCCTGAGG GCGTCGACGA TGGCGCCGTG CGTAAGCAAC TGCTCGAAAA CTATAACCTG
GAGATAGGTG CCGGTCTGGG CGCTTTGGCC GGTAAGGCCT GGCGTATCGG CCTGATGGGC
TTCGGTGCTC GGCGCGAGAA TGTCGCCCTA TGCCTAAGAG CGTTAGAGGA AGTGCTGCGT
TAA
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| Protein sequence | MLAAPKVTPF NPPRRVLMGP GPSDVYPEVL AAQARPTIGH LDPLFVGMMD ELKSLIQYAF
QTENAMTLAV SAPGSAGMET CFVNLVEPGE KVIVCRNGVF GERMRQNVER VGATAVVVDN
EWGTPVSLSD VEAALKAHPD AKFLAFVHAE TSTGALSDAK GLCQLAKAHD CLSIVDAVTS
LGGVELRVDE WGIDAIYSGS QKCLSCVPGL SPVSFSPAAV EKLKARKTPV QSWFLDQSLV
MGYWSGDQGA GGKRSYHHTA PVNALYALHE SLRLLAEEGL ENAWARHHSM HALLRDGLEN
LGLKFVVEEG SRLPQLNAVY IPEGVDDGAV RKQLLENYNL EIGAGLGALA GKAWRIGLMG
FGARRENVAL CLRALEEVLR
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